RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 KLHDC1Q8N7A1 406 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 SCCPDHQ8NBX0 429 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 ZBTB34Q8NCN2 500 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 OR4C3Q8NH37 302 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 OR1F12Q8NHA8 337 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 DDIT4LQ96D03 193 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 WDR34Q96EX3 536 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 MRPL13Q9BYD1 178 aaKnown RBP3.15□□□□□ -1.91
MCF2-210ENST00000536274 NPFFR1Q9GZQ6 430 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 NAA60Q9H7X0 242 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 SLC39A9Q9NUM3 307 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 PLEKHJ1Q9NW61 149 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 DNAJB12Q9NXW2 375 aaKnown RBP3.15□□□□□ -1.91
MCF2-210ENST00000536274 NAT8BQ9UHF3 227 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 HHLA2Q9UM44 414 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 DAPP1Q9UN19 280 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 PSG11Q9UQ72 335 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 NCOA6Q14686 2063 aaPredicted RBP3.15□□□□□ -1.91
MCF2-210ENST00000536274 OTOGLQ3ZCN5 2332 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 KNTC1P50748 2209 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 ZNF407Q9C0G0 2248 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 CEP192Q8TEP8 1941 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 UBE2L5PA0A1B0GUS4 154 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 OR6C6A6NF89 314 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 TMEM14DPA8MWL7 114 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 ZNF732B4DXR9 585 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 KLK10O43240 276 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 ZNHIT1O43257 154 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 ANGPTL7O43827 346 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 CA1P00915 261 aaPredicted RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 CEACAM5P06731 702 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 ZNF728P0DKX0 622 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 HLA-DOBP13765 273 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 CEBPBP17676 345 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 MDH2P40926 338 aaKnown RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 TMEM249Q2WGJ8 235 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 WIPI1Q5MNZ9 446 aaPredicted RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 UFSP1Q6NVU6 142 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 DNM1P34Q6PK57 102 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 NEGR1Q7Z3B1 354 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 CENPVQ7Z7K6 275 aaPredicted RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 OOSP2Q86WS3 158 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 C9orf40Q8IXQ3 194 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 CYB5D2Q8WUJ1 264 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 BORCS7Q96B45 105 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 PLPPR2Q96GM1 343 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 C18orf12Q96KH6 178 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 C1orf147Q96MC9 270 aaPredicted RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 C18orf15Q96N68 181 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 WDR61Q9GZS3 305 aaKnown RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 COPS7AQ9UBW8 275 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 RALGAPA1Q6GYQ0 2036 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 TRAV9-2A0A087WT02 112 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 A0A1W2PPV9 198 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 E9PLN8 166 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 ZNF324O75467 553 aaPredicted RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 SCGB2A1O75556 95 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 IL11P20809 199 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 USF1P22415 310 aaPredicted RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 SRP14P37108 136 aaKnown RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 GUCA1AP43080 201 aaPredicted RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 GPR1P46091 355 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 RPS18P62269 152 aaKnown RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 ARF6P62330 175 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 WFDC2Q14508 124 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 KIR3DS1Q14943 382 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 C5orf64Q2M2E5 130 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 VWC2Q2TAL6 325 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 EIPR1Q53HC9 387 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 ACSM6Q6P461 480 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 GTF2H5Q6ZYL4 71 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 YAF2Q8IY57 180 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 ZNF611Q8N823 705 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 OR10G3Q8NGC4 313 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 DDB2Q92466 427 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 PIGTQ969N2 578 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 C8orf44Q96CB5 159 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 C11orf1Q9H5F2 150 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 STARD5Q9NSY2 213 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 HRASLS2Q9NWW9 162 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 OR51B2Q9Y5P1 312 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 PTPRBP23467 1997 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 FAM166BA8MTA8 275 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 CEACAM18A8MTB9 384 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 NUDT21O43809 227 aaKnown RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 PDE6DO43924 150 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 UCNP55089 124 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 EGR4Q05215 589 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 DCAF12Q5T6F0 453 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 RNASEKQ6P5S7 137 aaKnown RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 INO80CQ6PI98 192 aaPredicted RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 SLC22A24Q8N4F4 322 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 OR10G6Q8NH81 332 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 OR2T6Q8NHC8 308 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 OCC1Q8TAD7 63 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 KCNS1Q96KK3 526 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 LMLNQ96KR4 655 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 OR8B2Q96RD0 313 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 SSBP4Q9BWG4 385 aaPredicted RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 METTL7AQ9H8H3 244 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms