RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 WDR61Q9GZS3 305 aaKnown RBP11.09□□□□□ -0.63
VPS33B-202ENST00000535906 VSIRQ9H7M9 311 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 GNG13Q9P2W3 67 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 IL19Q9UHD0 177 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 C16orf97H3BN30 126 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 CYB5R3P00387 301 aaPredicted RBP11.09□□□□□ -0.63
VPS33B-202ENST00000535906 OR2B8PP59922 312 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 ZNF726P1Q15940 193 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 PRR30Q53SZ7 412 aaPredicted RBP11.09□□□□□ -0.63
VPS33B-202ENST00000535906 UTF1Q5T230 341 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 NCR3LG1Q68D85 454 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 ZNF787Q6DD87 383 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 TMEM14EPQ6UXP3 125 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 FAM222BQ8WU58 562 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 EDARADDQ8WWZ3 215 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 OR4C12Q96R67 309 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 CISD1Q9NZ45 108 aaKnown RBP11.09□□□□□ -0.63
VPS33B-202ENST00000535906 RNF7Q9UBF6 113 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 JPT1Q9UK76 154 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 ROS1P08922 2347 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 DSCAML1Q8TD84 2053 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 CLDN14O95500 239 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 IFNA17P01571 189 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 BCL2P10415 239 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 GPR12P47775 334 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 FABP9Q0Z7S8 132 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 TMEM108Q6UXF1 575 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 TCTEX1D1Q8N7M0 179 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 PINX1Q96BK5 328 aaKnown RBP11.08□□□□□ -0.64
VPS33B-202ENST00000535906 SNRNP40Q96DI7 357 aaKnown RBP11.08□□□□□ -0.64
VPS33B-202ENST00000535906 SIRT7Q9NRC8 400 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.08□□□□□ -0.64
VPS33B-202ENST00000535906 CXorf65A6NEN9 183 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 ZNF727A8MUV8 499 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 K7ENP7 123 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 F2RL2O00254 374 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 YPEL1O60688 119 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 DUTP33316 252 aaKnown RBP11.08□□□□□ -0.64
VPS33B-202ENST00000535906 SLC38A11Q08AI6 406 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 TMEM41BQ5BJD5 291 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 LCN15Q6UWW0 184 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 WFDC8Q8IUA0 241 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 DEFB108BQ8NET1 73 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 NUP37Q8NFH4 326 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 RCC1LQ96I51 464 aaKnown RBP11.08□□□□□ -0.64
VPS33B-202ENST00000535906 YPEL2Q96QA6 119 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
VPS33B-202ENST00000535906 ZNF665Q9H7R5 613 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 CLN8Q9UBY8 286 aa11.08□□□□□ -0.64
VPS33B-202ENST00000535906 DYSFO75923 2080 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 RAI1Q7Z5J4 1906 aaPredicted RBP11.07□□□□□ -0.64
VPS33B-202ENST00000535906 DPRXA6NFQ7 191 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 MARCH11A6NNE9 402 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 SMIM6P0DI80 62 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 CGB3P0DN86 165 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 CGB7P0DN87 165 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 SSX7Q7RTT5 188 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 H2BFWTQ7Z2G1 175 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 TAF15Q92804 592 aaKnown RBP eCLIP11.07□□□□□ -0.64
VPS33B-202ENST00000535906 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 DCAF16Q9NXF7 216 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 ELOVL5Q9NYP7 299 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 CALYQ9NYX4 217 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 ZNF835Q9Y2P0 537 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 RAB29O14966 203 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 THBDP07204 575 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 S100A12P80511 92 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 ELOBQ15370 118 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 C17orf58Q2M2W7 97 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 RPL39P5Q59GN2 51 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 FAM90A2PQ658T7 463 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 STUMQ69YW2 141 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 OR8G2PQ6IF36 304 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 LEAP2Q969E1 77 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 OR6C3Q9NZP0 311 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 TIMM9Q9Y5J7 89 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 PTPRQQ9UMZ3 2332 aa11.07□□□□□ -0.64
VPS33B-202ENST00000535906 UBE2L5PA0A1B0GUS4 154 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 B4DEV8 164 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 ZG16O60844 167 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 CD55P08174 381 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 FGF8P55075 233 aaPredicted RBP11.06□□□□□ -0.64
VPS33B-202ENST00000535906 RAB11AP62491 216 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 CCL8P80075 99 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 RBMS3Q6XE24 437 aaKnown RBP11.06□□□□□ -0.64
VPS33B-202ENST00000535906 C1orf229Q6ZS94 237 aaPredicted RBP11.06□□□□□ -0.64
VPS33B-202ENST00000535906 ZCCHC24Q8N2G6 241 aaKnown RBP11.06□□□□□ -0.64
VPS33B-202ENST00000535906 SDSLQ96GA7 329 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 P2RX4Q99571 388 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 IFI27L2Q9H2X8 130 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 JKAMPQ9P055 326 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 LAMP3Q9UQV4 416 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 TLN1Q9Y490 2541 aaKnown RBP11.06□□□□□ -0.64
VPS33B-202ENST00000535906 HCFC1P51610 2035 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 AP4M1O00189 453 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 SLC31A2O15432 143 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 FCGR3BO75015 233 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 RBMXL2O75526 392 aaKnown RBP11.06□□□□□ -0.64
VPS33B-202ENST00000535906 RPS10P46783 165 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms