RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	RBKS	Q9H477	322 aa		13.41	□□□□□ -0.26
NCAPD3-213	ENST00000534532	TMEM189	A5PLL7	270 aa		13.41	□□□□□ -0.26
NCAPD3-213	ENST00000534532	TGFBR3L	H3BV60	316 aa		13.41	□□□□□ -0.26
NCAPD3-213	ENST00000534532	ISLR	O14498	428 aa		13.41	□□□□□ -0.26
NCAPD3-213	ENST00000534532	UBE2L6	O14933	153 aa		13.41	□□□□□ -0.26
NCAPD3-213	ENST00000534532	CRYBA2	P53672	197 aa		13.41	□□□□□ -0.26
NCAPD3-213	ENST00000534532	MEF2C	Q06413	473 aa	Predicted RBP	13.41	□□□□□ -0.26
NCAPD3-213	ENST00000534532	NPFFR1	Q9GZQ6	430 aa		13.41	□□□□□ -0.26
NCAPD3-213	ENST00000534532		J3QR89	54 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	ATP6V0C	P27449	155 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	MAS1L	P35410	378 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	LINC01590	Q5TEZ4	76 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	EFEMP2	O95967	443 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	VAMP8	Q9BV40	100 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	MYOF	Q9NZM1	2061 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	NPIPB9	F8W1W9	429 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	KLF4	O43474	513 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	DSCR9	P59020	149 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	OR5AU1	Q8NGC0	362 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	TNFSF18	Q9UNG2	199 aa		13.4	□□□□□ -0.26
NCAPD3-213	ENST00000534532	ATP5I	P56385	69 aa	Predicted RBP	13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	RELB	Q01201	579 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ACACA	Q13085	2346 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	CGB1	A6NKQ9	187 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	CRX	O43186	299 aa	Predicted RBP	13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	SSTR5	P35346	364 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	MEOX2	P50222	304 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PQLC2	Q6ZP29	291 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	FAM90A1	Q86YD7	464 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	LRRC75A	Q8NAA5	344 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	GPR132	Q9UNW8	380 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532		B4DEV8	164 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ZNF253	O75346	499 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ERVS71-1	P61550	626 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ZP3	P21754	424 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	FAM216B	Q8N7L0	139 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	MYOZ3	Q8TDC0	251 aa		13.39	□□□□□ -0.27
NCAPD3-213	ENST00000534532	HIST3H3	Q16695	136 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	MRPL54	Q6P161	138 aa	Known RBP	13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TOMM20L	Q6UXN7	152 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	POC1A	Q8NBT0	407 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TCF19	Q9Y242	345 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PSG7	Q13046	419 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	C19orf54	Q5BKX5	351 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TMEM252	Q8N6L7	170 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ZIC4	Q8N9L1	334 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ZG16	O60844	167 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PLAU	P00749	431 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	THBD	P07204	575 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TMEM8B	A6NDV4	472 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	GPR146	Q96CH1	333 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	BRCA1	P38398	1863 aa	Known RBP	13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	KLF7	O75840	302 aa	Predicted RBP	13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ZNF146	Q15072	292 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ABLIM2	Q6H8Q1	611 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	AP5S1	Q9NUS5	200 aa		13.38	□□□□□ -0.27
NCAPD3-213	ENST00000534532	SLC16A13	Q7RTY0	426 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	OSR1	Q8TAX0	266 aa	Predicted RBP	13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	C1QTNF5	Q9BXJ0	243 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	RBM38	Q9H0Z9	239 aa	Known RBP	13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	DNAJC4	Q9NNZ3	241 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	HSPB7	Q9UBY9	170 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532		A8MWL6	223 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	REG1A	P05451	166 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	VSIG10L2	P0DP72	767 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TXNDC17	Q9BRA2	123 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PGP	A6NDG6	321 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532		M0R2Z0	102 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	HLA-DQB1	P01920	261 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	DLX1	P56177	255 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	FAM24B	Q8N5W8	94 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	NEURL2	Q9BR09	285 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	SPTB	P11277	2137 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	IGKV3D-15	A0A087WSY6	115 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	IGKV3-15	P01624	115 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	SNRPC	P09234	159 aa	Known RBP	13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	HNRNPA3	P51991	378 aa	Known RBP	13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	SCGB1D4	Q6XE38	83 aa		13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.37	□□□□□ -0.27
NCAPD3-213	ENST00000534532	IQCF6	A8MYZ5	107 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	IGKV1D-33	P01593	117 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	IGKV1-33	P01594	117 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	MSRB2	Q9Y3D2	182 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	FAM74A7	A6NL05	159 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	IL18BP	O95998	194 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TWIST1	Q15672	202 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	HLA-DRB5	Q30154	266 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	FAM201A	Q5SY85	155 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	GPX1	P07203	203 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	IQCJ	Q1A5X6	159 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TMEM191A	Q9H0A3	160 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532		M0QZK8	103 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PLA2G10	O15496	165 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TIMP3	P35625	211 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	OR51G1	Q8NGK1	321 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	SEMA5B	Q9P283	1151 aa		13.36	□□□□□ -0.27
NCAPD3-213	ENST00000534532	CACNA1I	Q9P0X4	2223 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	CXCL3	P19876	107 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms