RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 OR6C6A6NF89 314 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 M0R381 172 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 CREBL2O60519 120 aaPredicted RBP0.49□□□□□ -2.33
ATM-220ENST00000533526 MT-CO2P00403 227 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 GP1BAP07359 652 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 PRB4P10163 310 aaPredicted RBP0.49□□□□□ -2.33
ATM-220ENST00000533526 CA5AP35218 305 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 FXYD7P58549 80 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 TPI1P60174 286 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 HIST1H4AP62805 103 aaKnown RBP0.49□□□□□ -2.33
ATM-220ENST00000533526 AKR1C1Q04828 323 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 CDK5R1Q15078 307 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 EBPQ15125 230 aaKnown RBP0.49□□□□□ -2.33
ATM-220ENST00000533526 LRRC75BQ2VPJ9 315 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 C17orf78Q8N4C9 275 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 ZNF675Q8TD23 568 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 TMA16Q96EY4 203 aaKnown RBP0.49□□□□□ -2.33
ATM-220ENST00000533526 NUMA1Q14980 2115 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 KIAA2026Q5HYC2 2103 aa0.49□□□□□ -2.33
ATM-220ENST00000533526 DSCAMO60469 2012 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 FLT4P35916 1363 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 IGHV1-18A0A0C4DH31 117 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 A0A0J9YW62 118 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 A0A1B0GW54 56 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 METTL15A6NJ78 407 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 ZNF879B4DU55 563 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 H7C2G1 150 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 NEMFO60524 1076 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 SCN2BO60939 215 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 CCR2P41597 374 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 CDK9P50750 372 aaKnown RBP0.48□□□□□ -2.33
ATM-220ENST00000533526 TMEM33P57088 247 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 FKBP1AP62942 108 aaKnown RBP0.48□□□□□ -2.33
ATM-220ENST00000533526 ARHGAP11BQ3KRB8 267 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 FAM45BPQ6NSW5 357 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 ZNF705AQ6ZN79 300 aaPredicted RBP0.48□□□□□ -2.33
ATM-220ENST00000533526 COPS6Q7L5N1 327 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 SLC36A1Q7Z2H8 476 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 C1orf174Q8IYL3 243 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 BLIDQ8IZY5 108 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 TMEM86AQ8N2M4 240 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 SFRP2Q96HF1 295 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 ODF3Q96PU9 254 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 NMNAT3Q96T66 252 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 AGPAT3Q9NRZ7 376 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 C1orf109Q9NX04 203 aa0.48□□□□□ -2.33
ATM-220ENST00000533526 RIMS2Q9UQ26 1411 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 SMARCA4P51532 1647 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 NOTCH1P46531 2555 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 DLG5Q8TDM6 1919 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 IGKV1-9A0A0C4DH69 117 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 HCRTO43612 131 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 ATP5G1P05496 136 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 TPM1P09493 284 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 MIPP30301 263 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 KDELR2P33947 212 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 CTAG1AP78358 180 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 FABP5Q01469 135 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 GNA13Q14344 377 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 MOGQ16653 247 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 Q1T7F1 81 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 LRRC26Q2I0M4 334 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 PLPPR5Q32ZL2 321 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 C9orf64Q5T6V5 341 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 RNASE6Q93091 150 aaKnown RBP0.47□□□□□ -2.33
ATM-220ENST00000533526 C12orf43Q96C57 262 aaKnown RBP0.47□□□□□ -2.33
ATM-220ENST00000533526 C19orf60Q96EN9 201 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 RBP7Q96R05 134 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 MROQ9BYG7 248 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 TTTY13Q9BZ97 58 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 CHMP5Q9NZZ3 219 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 HDGFL3Q9Y3E1 203 aa0.47□□□□□ -2.33
ATM-220ENST00000533526 PCYT1BQ9Y5K3 369 aaPredicted RBP0.47□□□□□ -2.33
ATM-220ENST00000533526 SCAF11Q99590 1463 aaKnown RBP0.47□□□□□ -2.33
ATM-220ENST00000533526 A0A1W2PP64 1363 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 TMEM94Q12767 1356 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 TRAV7A0A075B6U4 112 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 TRAV38-1A0A0B4J264 116 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 A0A0D9SEW6 157 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 C9JCJ5 164 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 ATP8B1O43520 1251 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 ORC5O43913 435 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 STX10O60499 249 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 LGALS1P09382 135 aaKnown RBP0.46□□□□□ -2.34
ATM-220ENST00000533526 SYT1P21579 422 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 AQP4P55087 323 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 SMAGPQ0VAQ4 97 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 SLAMF1Q13291 335 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 SURF2Q15527 256 aaPredicted RBP0.46□□□□□ -2.34
ATM-220ENST00000533526 CRLF3Q8IUI8 442 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 Q8N2B8 174 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 OR10D3Q8NH80 312 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 PPCDCQ96CD2 204 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 IMMP2LQ96T52 175 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 XAGE1AQ9HD64 81 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 ZNHIT6Q9NWK9 470 aaKnown RBP0.46□□□□□ -2.34
ATM-220ENST00000533526 MYH11P35749 1972 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 ROS1P08922 2347 aa0.46□□□□□ -2.34
ATM-220ENST00000533526 ABCC12Q96J65 1359 aa0.45□□□□□ -2.34
ATM-220ENST00000533526 TEX50A0A1B0GTY4 177 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms