RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 TSPAN5P62079 268 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 ZNF329Q86UD4 541 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 C1QL4Q86Z23 238 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 OR4C16Q8NGL9 310 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 OR10J5Q8NHC4 309 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 SCGB3A2Q96PL1 93 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 SLC25A21Q9BQT8 299 aaPredicted RBP13.14□□□□□ -0.31
PKP3-209ENST00000533069 EHFQ9NZC4 300 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 TBC1D24Q9ULP9 559 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 G3V4G9 280 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 PF4P02776 101 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 OR5H8P0DN80 308 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 SLC6A1P30531 599 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 CEACAM6P40199 344 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 F2RL1P55085 397 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 MMDQ15546 238 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 KPRPQ5T749 579 aaPredicted RBP13.13□□□□□ -0.31
PKP3-209ENST00000533069 DHRS11Q6UWP2 260 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 OR6F1Q8NGZ6 308 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 ENKURQ8TC29 256 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 GIMAP1Q8WWP7 306 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 GINS4Q9BRT9 223 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 TOLLIPQ9H0E2 274 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 ZFP57Q9NU63 452 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 OR1A1Q9P1Q5 309 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 ZNF580Q9UK33 172 aa13.13□□□□□ -0.31
PKP3-209ENST00000533069 TRBV6-7A0A0A0MS04 114 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 FAM240BA0A1B0GVZ2 78 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 SCTP09683 121 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 GSTT2P0CG29 244 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 RFX2P48378 723 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 RBMS2Q15434 407 aaKnown RBP13.12□□□□□ -0.31
PKP3-209ENST00000533069 SURF2Q15527 256 aaPredicted RBP13.12□□□□□ -0.31
PKP3-209ENST00000533069 BEAN1Q3B7T3 259 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 TEX38Q6PEX7 206 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 WFDC9Q8NEX5 89 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 ZNF251Q9BRH9 671 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 AGMATQ9BSE5 352 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 C11orf54Q9H0W9 315 aaPredicted RBP13.12□□□□□ -0.31
PKP3-209ENST00000533069 LINC00527Q9UJ94 153 aa13.12□□□□□ -0.31
PKP3-209ENST00000533069 OR5H14A6NHG9 310 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 LINC01548A6NM66 108 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 NBR2O15453 112 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 PMP2P02689 132 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 CD33P20138 364 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 MC5RP33032 325 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 RPL23AP62750 156 aaKnown RBP13.11□□□□□ -0.31
PKP3-209ENST00000533069 RPL39P5Q59GN2 51 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 LPCAT3Q6P1A2 487 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 TERB2Q8NHR7 220 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 MAFIPQ8WZ33 124 aa13.11□□□□□ -0.31
PKP3-209ENST00000533069 PARP12Q9H0J9 701 aaKnown RBP13.11□□□□□ -0.31
PKP3-209ENST00000533069 IGKV1D-8A0A087WSZ0 117 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 IGKV1-6A0A0C4DH72 117 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 LINC00854A0A1B0GVQ3 168 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 M0QYG6 137 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 SLC22A5O76082 557 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 HLA-DRB1P01911 266 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 IGF1P05019 195 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 VDAC1P21796 283 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 NPBQ8NG41 125 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 ABHD14BQ96IU4 210 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 TINAGL1Q9GZM7 467 aaPredicted RBP13.1□□□□□ -0.31
PKP3-209ENST00000533069 KIAA1456Q9P272 454 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 ZNF221Q9UK13 617 aa13.1□□□□□ -0.31
PKP3-209ENST00000533069 BET1O15155 118 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 TUSC2O75896 110 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 NDUFA3O95167 84 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 ZNF735P0CB33 412 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 CT45A6P0DMU7 189 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 CT45A5P0DMU8 189 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 CT45A7P0DMV0 189 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 UCP3P55916 312 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 HERV-K104P61576 105 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 FOXE3Q13461 319 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 C5orf64Q2M2E5 130 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 TRIM16LQ309B1 348 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 PLET1Q6UQ28 207 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 IDO2Q6ZQW0 420 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 REC114Q7Z4M0 266 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 LHFPL1Q86WI0 220 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 H1FOOQ8IZA3 346 aaPredicted RBP13.09□□□□□ -0.31
PKP3-209ENST00000533069 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.09□□□□□ -0.31
PKP3-209ENST00000533069 OR5AN1Q8NGI8 311 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 OR51S1Q8NGJ8 323 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 RDH8Q9NYR8 311 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 WASHC3Q9Y3C0 194 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 NUBP2Q9Y5Y2 271 aa13.09□□□□□ -0.31
PKP3-209ENST00000533069 NUDT19A8MXV4 375 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 H0YJW9 148 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 NDUFB6O95139 128 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 ELANEP08246 267 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 FCGR2CP31995 323 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 CFHR3Q02985 330 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 OXA1LQ15070 435 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 MSMO1Q15800 293 aa13.08□□□□□ -0.32
PKP3-209ENST00000533069 SCGB2B2Q4G0G5 96 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms