RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 C11orf88Q6PI97 169 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 PDPNQ86YL7 162 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 FLYWCH2Q96CP2 140 aaKnown RBP14.16□□□□□ -0.14
CTSB-222ENST00000531551 PRR13Q9NZ81 148 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 CUBNO60494 3623 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 SERPINE2P07093 398 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 FAM157CP0CG43 387 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 VSIG10L2P0DP72 767 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 RRASP10301 218 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 TMEM11P17152 192 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 KIR2DS2P43631 304 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 IER3P46695 156 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 RPS16P62249 146 aaKnown RBP14.16□□□□□ -0.14
CTSB-222ENST00000531551 TMEM219Q86XT9 240 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 OR2T10Q8NGZ9 312 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 OR4S2Q8NH73 311 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 PIFOQ8TCI5 191 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 CASTOR1Q8WTX7 329 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 EAF1Q96JC9 268 aaPredicted RBP14.16□□□□□ -0.14
CTSB-222ENST00000531551 RITA1Q96K30 269 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 MXRA5Q9NR99 2828 aa14.16□□□□□ -0.14
CTSB-222ENST00000531551 NAV3Q8IVL0 2385 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 FAM90A9PA6NNJ1 464 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 H0Y980 276 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 SHOXO15266 292 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 MOSP00540 346 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 HLA-AP01891 365 aaKnown RBP14.15□□□□□ -0.14
CTSB-222ENST00000531551 ANXA3P12429 323 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 LPAR6P43657 344 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 DYNLT3P51808 116 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 SUPT4H1P63272 117 aaKnown RBP14.15□□□□□ -0.14
CTSB-222ENST00000531551 OR4C13Q8NGP0 309 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 CD300LFQ8TDQ1 290 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 ZNF418Q8TF45 676 aaPredicted RBP14.15□□□□□ -0.14
CTSB-222ENST00000531551 SSMEM1Q8WWF3 244 aa14.15□□□□□ -0.14
CTSB-222ENST00000531551 IFNA2P01563 188 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 DHODHQ02127 395 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 AANATQ16613 207 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 OR52B4Q8NGK2 314 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 HARBI1Q96MB7 349 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 MARVELD1Q9BSK0 173 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 PRDM13Q9H4Q3 707 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 S1PR2O95136 353 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 RPA2P15927 270 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 OXA1LQ15070 435 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 THNSL2Q86YJ6 484 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 SEC22CQ9BRL7 303 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 TCF19Q9Y242 345 aa14.14□□□□□ -0.15
CTSB-222ENST00000531551 C9orf170A2RU37 121 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 NCBP2LA6PVI3 153 aaKnown RBP14.13□□□□□ -0.15
CTSB-222ENST00000531551 SFT2D2O95562 160 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 DHFRP00374 187 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 HPRT1P00492 218 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 CNTFRP26992 372 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 UBE2MP61081 183 aaKnown RBP14.13□□□□□ -0.15
CTSB-222ENST00000531551 DHRS2Q13268 280 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 MMDQ15546 238 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 ZNF585BQ52M93 769 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 DHRS7BQ6IAN0 325 aaPredicted RBP14.13□□□□□ -0.15
CTSB-222ENST00000531551 TCTEX1D1Q8N7M0 179 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 OR5R1Q8NH85 324 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 GLYATL2Q8WU03 294 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 GALNT14Q96FL9 552 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 TMEM222Q9H0R3 208 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 ALX4Q9H161 411 aaPredicted RBP14.13□□□□□ -0.15
CTSB-222ENST00000531551 PITPNC1Q9UKF7 332 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 MTORP42345 2549 aa14.13□□□□□ -0.15
CTSB-222ENST00000531551 TMEM177Q53S58 311 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 SSX9Q7RTT3 188 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 LYG2Q86SG7 212 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 VKORC1L1Q8N0U8 176 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 RBFOX2O43251 390 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■■■□□ 18.4
CTSB-222ENST00000531551 B3GALNT1O75752 331 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 UCP1P25874 307 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 MECP2P51608 486 aaKnown RBP14.12□□□□□ -0.15
CTSB-222ENST00000531551 F2RL1P55085 397 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 EBI3Q14213 229 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 TMEM187Q14656 261 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 ZNF695Q8IW36 515 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 OSR1Q8TAX0 266 aaPredicted RBP14.12□□□□□ -0.15
CTSB-222ENST00000531551 SLC25A33Q9BSK2 321 aa14.12□□□□□ -0.15
CTSB-222ENST00000531551 FN1P02751 2386 aaKnown RBP14.11□□□□□ -0.15
CTSB-222ENST00000531551 A6NDX4 124 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 SRRM4A7MD48 611 aaKnown RBP14.11□□□□□ -0.15
CTSB-222ENST00000531551 KRASP01116 189 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 TUSC1Q2TAM9 212 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 TMEM268Q5VZI3 342 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 LIN54Q6MZP7 749 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 UXS1Q8NBZ7 420 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 DMBX1Q8NFW5 382 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 CHPT1Q8WUD6 406 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 CHIAQ9BZP6 476 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 PLEKHA2Q9HB19 425 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 VPREB3Q9UKI3 123 aa14.11□□□□□ -0.15
CTSB-222ENST00000531551 NSD1Q96L73 2696 aaPredicted RBP14.11□□□□□ -0.15
CTSB-222ENST00000531551 DNAJC9-AS1A6NH13 148 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 HRASP01112 189 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 G6PCP35575 357 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 RAG2P55895 527 aa14.1□□□□□ -0.15
CTSB-222ENST00000531551 PLGLAQ15195 96 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms