RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 CLDN1O95832 211 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 CELA3AP09093 270 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 IAPPP10997 89 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 DEFA4P12838 97 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 IGFBP2P18065 325 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 UQCRFS1P47985 274 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 REG1BP48304 166 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 PLCXD2Q0VAA5 305 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 ZNF77Q15935 545 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 RPEL1Q2QD12 228 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 TMEM97Q5BJF2 176 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 FNDC7Q5VTL7 733 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 Q6ZPA2 131 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 RAB42Q8N4Z0 105 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 OR8B12Q8NGG6 310 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 VSTM2AQ8TAG5 236 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 SPSB4Q96A44 273 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 ABHD17AQ96GS6 310 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 KCNIP2Q9NS61 270 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 TNFRSF18Q9Y5U5 241 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 SPCS1Q9Y6A9 102 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 LRRK1Q38SD2 2015 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.55□□□□□ -1.36
PTPRK-219ENST00000531050 IFI6P09912 130 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 CISD3P0C7P0 127 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 LINC00271P0C7V0 271 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 CCL2P13500 99 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 HTR1DP28221 377 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 HBG1P69891 147 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 HBG2P69892 147 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 CX3CL1P78423 397 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 SGCBQ16585 318 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 IZUMO4Q1ZYL8 232 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 NT5CQ8TCD5 201 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 LSM10Q969L4 123 aaKnown RBP6.55□□□□□ -1.36
PTPRK-219ENST00000531050 C10orf35Q96D05 121 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 TMEM70Q9BUB7 260 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 FGF21Q9NSA1 209 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 MRPL16Q9NX20 251 aaKnown RBP6.55□□□□□ -1.36
PTPRK-219ENST00000531050 PSENENQ9NZ42 101 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 C1RLQ9NZP8 487 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 COPS7AQ9UBW8 275 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 WNT6Q9Y6F9 365 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 V9GYV3 84 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 ATG2BQ96BY7 2078 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 EDDM13A0A1B0GTR0 161 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 A0A1W2PPM0 123 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 CRXO43186 299 aaPredicted RBP6.55□□□□□ -1.36
PTPRK-219ENST00000531050 IGHMP01871 453 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 STAG3L2P0CL84 134 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 ADH5P11766 374 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 CCL5P13501 91 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 CCL1P22362 96 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 USF1P22415 310 aaPredicted RBP6.55□□□□□ -1.36
PTPRK-219ENST00000531050 FAM120AOSQ5T036 256 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 Q6ZRM9 215 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 PRSS41Q7RTY9 318 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 BCORP1Q8N888 145 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 RDH5Q92781 318 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 FGF14Q92915 247 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 FAM131CQ96AQ9 280 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 RNF183Q96D59 192 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 TMEM204Q9BSN7 226 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 NOTCH4Q99466 2003 aa6.55□□□□□ -1.36
PTPRK-219ENST00000531050 TRAV36DV7A0A075B6V5 113 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 VWC2LB2RUY7 222 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 HSBP1O75506 76 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 RHBDL1O75783 438 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 CLEC3BP05452 202 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 HLA-DOBP13765 273 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 ZNF121P58317 390 aaPredicted RBP6.54□□□□□ -1.36
PTPRK-219ENST00000531050 SLC38A11Q08AI6 406 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 WDR74Q6RFH5 385 aaPredicted RBP6.54□□□□□ -1.36
PTPRK-219ENST00000531050 ZNF818PQ6ZRF7 136 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 GAPTQ8N292 157 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 STPG3Q8N7X2 389 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 TECRQ9NZ01 308 aaKnown RBP6.54□□□□□ -1.36
PTPRK-219ENST00000531050 MUC22E2RYF6 1773 aaPredicted RBP6.54□□□□□ -1.36
PTPRK-219ENST00000531050 TMEM265A0A087WTH1 108 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 SCO2A0A1W2PP80 73 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 HIST1H1EP10412 219 aaKnown RBP6.54□□□□□ -1.36
PTPRK-219ENST00000531050 RPS18P62269 152 aaKnown RBP6.54□□□□□ -1.36
PTPRK-219ENST00000531050 C1orf53Q5VUE5 145 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 ADAMTSL5Q6ZMM2 481 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 DOK3Q7L591 496 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 ZDHHC23Q8IYP9 409 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 PRR22Q8IZ63 422 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 OR5D13Q8NGL4 314 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 TMEM45BQ96B21 275 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 DUSP23Q9BVJ7 150 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 HINT2Q9BX68 163 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 SPANXB1Q9NS25 103 aaPredicted RBP6.54□□□□□ -1.36
PTPRK-219ENST00000531050 CLCF1Q9UBD9 225 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 PILRAQ9UKJ1 303 aa6.54□□□□□ -1.36
PTPRK-219ENST00000531050 A0A1B0GW15 77 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 C5orf63A6NC05 138 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 SIVA1O15304 175 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 SYNGR2O43760 224 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 APCSP02743 223 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 AMY1AP04745 511 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms