RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 SRP19P09132 144 aaKnown RBP13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 PCOLCEQ15113 449 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 ASPHD2Q6ICH7 369 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 LINC00114Q6XXX2 140 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 MMD2Q8IY49 270 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 SHISA5Q8N114 240 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 TRBV9A0A0B4J1U6 114 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 GAGE10A6NGK3 116 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 ATXN7O15265 892 aaPredicted RBP13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 CA2P00918 260 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 IGLV3-19P01714 112 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 ZNF658BQ4V348 819 aaPredicted RBP13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 LY6G6FQ5SQ64 297 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 SLC35E4Q6ICL7 350 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 RCC1LQ96I51 464 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 RTBDNQ9BSG5 229 aaPredicted RBP13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 RPL27AP46776 148 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 SPSB4Q96A44 273 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 TM2D1Q9BX74 207 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 LEPROTL1O95214 131 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 AMY1AP04745 511 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 CTSBP07858 339 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 SOD3P08294 240 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 LCN2P80188 198 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 FAM222BQ8WU58 562 aa13.22□□□□□ -0.29
PCDHA4-203ENST00000530339 LOC101059948A0A1B0GTJ6 334 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 ZG16O60844 167 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 LINC00869P0C866 280 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 BIVMQ86UB2 503 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 WDR31Q8NA23 367 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 ZNF646O15015 1829 aaPredicted RBP13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 A0A1W2PPE3 182 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 SMAGPQ0VAQ4 97 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 TNFRSF19Q9NS68 423 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 C5orf52A6NGY3 159 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 ARL14EPLP0DKL9 152 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 SRIP30626 198 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 SFRP2Q96HF1 295 aa13.21□□□□□ -0.29
PCDHA4-203ENST00000530339 CEACAM18A8MTB9 384 aa13.21□□□□□ -0.3
PCDHA4-203ENST00000530339 GCSHP23434 173 aa13.21□□□□□ -0.3
PCDHA4-203ENST00000530339 ID1P41134 155 aa13.21□□□□□ -0.3
PCDHA4-203ENST00000530339 TAS2R60P59551 318 aa13.21□□□□□ -0.3
PCDHA4-203ENST00000530339 CYP2G1PQ6ZSU1 146 aa13.21□□□□□ -0.3
PCDHA4-203ENST00000530339 LINC00469Q8N7U9 141 aa13.21□□□□□ -0.3
PCDHA4-203ENST00000530339 MYOZ3Q8TDC0 251 aa13.21□□□□□ -0.3
PCDHA4-203ENST00000530339 ZCCHC14Q8WYQ9 949 aaKnown RBP13.21□□□□□ -0.3
PCDHA4-203ENST00000530339 XIRP1Q702N8 1843 aaKnown RBP13.21□□□□□ -0.3
PCDHA4-203ENST00000530339 RELBQ01201 579 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 IZUMO4Q1ZYL8 232 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 IGHV3OR15-7A0A075B7D8 119 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 MARCH11A6NNE9 402 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 J3QRE1 110 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 PSMB2P49721 201 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 SRSF9Q13242 221 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 SLC25A34Q6PIV7 304 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 WFIKKN1Q96NZ8 548 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 TMEM140Q9NV12 185 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 IDI2-AS1Q9NZ38 188 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 SIPA1L1O43166 1804 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 GRIFINA4D1Z8 144 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 IGFBP3P17936 291 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 CLDN18P56856 261 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 MRPL37Q9BZE1 423 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 WNT5BQ9H1J7 359 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 FAM157AC9JC47 383 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 FGF16O43320 207 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 FOLR2P14207 255 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 NPBWR2P48146 333 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 NMUP48645 174 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 MMDQ15546 238 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 C1QL2Q7Z5L3 287 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 PRNTQ86SH4 94 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 RNF126Q9BV68 326 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 CLEC5AQ9NY25 188 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 LOC285556D6RIA3 1793 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 ZNF236Q9UL36 1845 aa13.2□□□□□ -0.3
PCDHA4-203ENST00000530339 F8VVB4 439 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 F8VWA3 439 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 TBX6O95947 436 aaPredicted RBP13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 AICDAQ9GZX7 198 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 TRAV30A0A087WSZ9 112 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 IGKV3D-11A0A0A0MRZ8 115 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 CTSSP25774 331 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 PCP4P48539 62 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 HSPE1P61604 102 aaKnown RBP13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 RPL8P62917 257 aaKnown RBP13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 ZNF430Q9H8G1 570 aaPredicted RBP13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 ODAMA1E959 279 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 CELA2AP08217 269 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 GAS1P54826 345 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 LEMD1Q68G75 181 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 SPSB2Q99619 263 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 FOXD3Q9UJU5 478 aaPredicted RBP13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 TMSB15BA0A087X1C1 80 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 ZNF883P0CG24 379 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 KLRB1Q12918 225 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 OR10S1Q8NGN2 331 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 LRRC75BQ2VPJ9 315 aa13.19□□□□□ -0.3
PCDHA4-203ENST00000530339 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms