RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 FBLN5Q9UBX5 448 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 PSPNO60542 156 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 SMPD2O60906 423 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 GATA2P23769 480 aaPredicted RBP10.45□□□□□ -0.74
SCN3B-206ENST00000530277 ACP1P24666 158 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 UBE2G1P62253 170 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 PRR31Q5SQ13 230 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 ABLIM2Q6H8Q1 611 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 OR2T10Q8NGZ9 312 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 GATAD1Q8WUU5 269 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 COX7A2P2O60397 106 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 REG1AP05451 166 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 CD1BP29016 333 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 MEF2BQ02080 365 aaPredicted RBP10.45□□□□□ -0.74
SCN3B-206ENST00000530277 OR8G5Q8NG78 346 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 WDYHV1Q96HA8 205 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 BTF3L4Q96K17 158 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 DDA1Q9BW61 102 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 SAP30LQ9HAJ7 183 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 NAT8BQ9UHF3 227 aa10.45□□□□□ -0.74
SCN3B-206ENST00000530277 LOC102724200A0A096LPH7 203 aaPredicted RBP10.44□□□□□ -0.74
SCN3B-206ENST00000530277 FAM157CP0CG43 387 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 CTSSP25774 331 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 UCP1P25874 307 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 B3GALT5-AS1P59052 145 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 HCP5Q6MZN7 132 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 MRGPRGQ86SM5 289 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 TMEM265A0A087WTH1 108 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 RRP8O43159 456 aaKnown RBP10.44□□□□□ -0.74
SCN3B-206ENST00000530277 NDUFB3O43676 98 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 CHRNB4P30926 498 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 RPL31P62899 125 aaKnown RBP10.44□□□□□ -0.74
SCN3B-206ENST00000530277 HIST3H3Q16695 136 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 TMEM108Q6UXF1 575 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 TOMM20LQ6UXN7 152 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 PACRGQ96M98 296 aaPredicted RBP10.44□□□□□ -0.74
SCN3B-206ENST00000530277 HARBI1Q96MB7 349 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 QTRT1Q9BXR0 403 aaKnown RBP10.44□□□□□ -0.74
SCN3B-206ENST00000530277 OR51M1Q9H341 326 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 NGBQ9NPG2 151 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 TLN2Q9Y4G6 2542 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 FCN1O00602 326 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 GZMHP20718 246 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 NPY1RP25929 384 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 TNFSF10P50591 281 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 SUMO1P63165 101 aaKnown RBP10.44□□□□□ -0.74
SCN3B-206ENST00000530277 RBPJQ06330 500 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 DHRS7BQ6IAN0 325 aaPredicted RBP10.44□□□□□ -0.74
SCN3B-206ENST00000530277 SGMS2Q8NHU3 365 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 FAM122AQ96E09 287 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 PLXNB1O43157 2135 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 DENND4AQ7Z401 1863 aa10.44□□□□□ -0.74
SCN3B-206ENST00000530277 CCDC168Q8NDH2 2452 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 ZNF891A8MT65 544 aaPredicted RBP10.43□□□□□ -0.74
SCN3B-206ENST00000530277 PTBP3O95758 552 aaKnown RBP10.43□□□□□ -0.74
SCN3B-206ENST00000530277 RBP4P02753 201 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 ZNF25P17030 456 aaPredicted RBP10.43□□□□□ -0.74
SCN3B-206ENST00000530277 RAB4AP20338 218 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 KHDC3LQ587J8 217 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 FAM216BQ8N7L0 139 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 OR10A7Q8NGE5 316 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 CMTM2Q8TAZ6 248 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 GGACTQ9BVM4 153 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 HES4Q9HCC6 221 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 MYO15AQ9UKN7 3530 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 MED12LQ86YW9 2145 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 MYO9AB2RTY4 2548 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 KIAA1549LQ6ZVL6 1849 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 J3QR06 171 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 FGF16O43320 207 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 IL18BPO95998 194 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 HRASP01112 189 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 GFRA1P56159 465 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 HABP2Q14520 560 aaPredicted RBP10.43□□□□□ -0.74
SCN3B-206ENST00000530277 KIAA1644Q3SXP7 199 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 Q6ZRM9 215 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 OR4S2Q8NH73 311 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 BCL2L2Q92843 193 aaPredicted RBP10.43□□□□□ -0.74
SCN3B-206ENST00000530277 ZNF331Q9NQX6 463 aaPredicted RBP10.43□□□□□ -0.74
SCN3B-206ENST00000530277 ONECUT1Q9UBC0 465 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 NAT8Q9UHE5 227 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 PIEZO1Q92508 2521 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 DBX1A6NMT0 343 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 RPS2P15880 293 aaKnown RBP10.43□□□□□ -0.74
SCN3B-206ENST00000530277 CSRP1P21291 193 aaKnown RBP10.43□□□□□ -0.74
SCN3B-206ENST00000530277 ERVFRD-1P60508 538 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 TGIF2LXQ8IUE1 241 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 OR6C3Q9NZP0 311 aa10.43□□□□□ -0.74
SCN3B-206ENST00000530277 ZNF106Q9H2Y7 1883 aaKnown RBP10.43□□□□□ -0.74
SCN3B-206ENST00000530277 TNFRSF1AP19438 455 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 LGALS4P56470 323 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 HERPUD1Q15011 391 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 LHFPL4Q7Z7J7 247 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 OR5B3Q8NH48 314 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 GTF3AQ92664 365 aaKnown RBP10.42□□□□□ -0.74
SCN3B-206ENST00000530277 COA4Q9NYJ1 87 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 H1FOOQ8IZA3 346 aaPredicted RBP10.42□□□□□ -0.74
SCN3B-206ENST00000530277 TMEM18Q96B42 140 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 TXN2Q99757 166 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms