RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 C20orf196Q8IYI0 205 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 OR51A2Q8NGJ7 313 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 OR2K2Q8NGT1 345 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 LHFPL5Q8TAF8 219 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 DYDC1Q8WWB3 177 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 ITLN2Q8WWU7 325 aaPredicted RBP2.45□□□□□ -2.02
C11orf88-204ENST00000529661 MS4A6EQ96DS6 147 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 ZHX1-C8orf76Q96EF9 292 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 SLC25A44Q96H78 314 aaPredicted RBP2.45□□□□□ -2.02
C11orf88-204ENST00000529661 ABHD14BQ96IU4 210 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 PPP1R2P1Q96PQ5 205 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 FAM60AQ9NP50 221 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 ENY2Q9NPA8 101 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 BIN3Q9NQY0 253 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 INIPQ9NRY2 104 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 OPTCQ9UBM4 332 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 TIMM22Q9Y584 194 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 COL1A2P08123 1366 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 NLRC5Q86WI3 1866 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 IGHV3-43A0A0B4J1X8 118 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 OR4C45A6NMZ5 311 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 OR11H12B2RN74 326 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 PPP5D1E7EU14 171 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 MRASO14807 208 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 PDE6DO43924 150 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 ATG12O94817 140 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 APOMO95445 188 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 IFNA21P01568 189 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 IFNA14P01570 189 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 NBEAP1P0C6P0 100 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 FGF6P10767 208 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 CDK2P24941 298 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 RPL5P46777 297 aaKnown RBP2.44□□□□□ -2.02
C11orf88-204ENST00000529661 LINC00313P59037 77 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 TAS2R41P59536 307 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 RBX1P62877 108 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 GNG3P63215 75 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 TSNQ15631 228 aaKnown RBP2.44□□□□□ -2.02
C11orf88-204ENST00000529661 ARHGAP11BQ3KRB8 267 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 C3orf33Q6P1S2 294 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 SPINT4Q6UDR6 99 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 OR11H1Q8NG94 326 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 OR52L1Q8NGH7 329 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 OR11H2Q8NH07 326 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 OR10A6Q8NH74 314 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 C2orf15Q8WU43 125 aaKnown RBP2.44□□□□□ -2.02
C11orf88-204ENST00000529661 KCTD4Q8WVF5 259 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 TRIB3Q96RU7 358 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 ULBP3Q9BZM4 244 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 ALX4Q9H161 411 aaPredicted RBP2.44□□□□□ -2.02
C11orf88-204ENST00000529661 DHCR7Q9UBM7 475 aaKnown RBP2.44□□□□□ -2.02
C11orf88-204ENST00000529661 PKIGQ9Y2B9 76 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 PXMP4Q9Y6I8 212 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 MTUS2Q5JR59 1369 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 PEG3Q9GZU2 1588 aa2.44□□□□□ -2.02
C11orf88-204ENST00000529661 RALGAPA2Q2PPJ7 1873 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 EXOC1LA0A1B0GW35 172 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 hADV38S2A0JD32 116 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 FUOMA2VDF0 154 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 C4orf51C9J302 202 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 INMT-MINDY4F8WBC2 141 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 M0R381 172 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 OPN1SWP03999 348 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 PTHLHP12272 177 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 GABRA3P34903 492 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 OPRM1P35372 400 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 CA7P43166 264 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 TCTAP57738 103 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 HSPE1P61604 102 aaKnown RBP2.43□□□□□ -2.02
C11orf88-204ENST00000529661 ZCWPW2Q504Y3 356 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 LAIR2Q6ISS4 152 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 DAZ4Q86SG3 579 aaKnown RBP2.43□□□□□ -2.02
C11orf88-204ENST00000529661 LRP11Q86VZ4 500 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 SLC35F6Q8N357 371 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 KRTCAP2Q8N6L1 136 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 OR2T4Q8NH00 348 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 CMBLQ96DG6 245 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 CPNE2Q96FN4 548 aaPredicted RBP2.43□□□□□ -2.02
C11orf88-204ENST00000529661 B9D2Q9BPU9 175 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 DAZ1Q9NQZ3 744 aaKnown RBP2.43□□□□□ -2.02
C11orf88-204ENST00000529661 BATF3Q9NR55 127 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 RSL24D1Q9UHA3 163 aaKnown RBP2.43□□□□□ -2.02
C11orf88-204ENST00000529661 DNAJC12Q9UKB3 198 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 PYCARDQ9ULZ3 195 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 ANAPC10Q9UM13 185 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 NDUFAF1Q9Y375 327 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 ADGRL1O94910 1474 aa2.43□□□□□ -2.02
C11orf88-204ENST00000529661 ZNF638Q14966 1978 aaKnown RBP2.42□□□□□ -2.02
C11orf88-204ENST00000529661 SCN10AQ9Y5Y9 1956 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 RTL1A6NKG5 1358 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 NUP155O75694 1391 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 TMED7-TICAM2A0A0A6YYA0 188 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 IGHV1-69-2A0A0G2JMI3 117 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 FAM236DA0A1B0GTK5 79 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 S1PR2O95136 353 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 NRASP01111 189 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 HRASP01112 189 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 KRASP01116 189 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 PFN1P07737 140 aaKnown RBP2.42□□□□□ -2.02
C11orf88-204ENST00000529661 SULT1A3P0DMM9 295 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms