RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 IGHV3-72A0A0B4J1Y9 119 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 C7orf66A4D0T2 115 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 FABP12A6NFH5 140 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 IFITM5A6NNB3 132 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF736B4DX44 427 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-212ENST00000528930 M0QZK8 103 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 PDCD5O14737 125 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 PLA2G10O15496 165 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 PEX14O75381 377 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 LPLP06858 475 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 RRASP10301 218 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 TMEM11P17152 192 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 RAB3BP20337 219 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 IL3RAP26951 378 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 CD1BP29016 333 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 SDC2P34741 201 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 PPP1CCP36873 323 aaKnown RBP6.67□□□□□ -1.34
SSBP3-212ENST00000528930 RPS19P39019 145 aaKnown RBP6.67□□□□□ -1.34
SSBP3-212ENST00000528930 HES1Q14469 280 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 HNF4GQ14541 408 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 BAK1Q16611 211 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 MOGAT2Q3SYC2 334 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 TCTEX1D4Q5JR98 221 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 TOR2AQ5JU69 321 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 C22orf42Q6IC83 251 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 TEX261Q6UWH6 196 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 IZUMO1Q8IYV9 350 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 LYG1Q8N1E2 194 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 C9orf62Q8N4C0 152 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 C5orf56Q8N8D9 126 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF680Q8NEM1 530 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 ENKURQ8TC29 256 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 ACOT12Q8WYK0 555 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 GALMQ96C23 342 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 ARHGAP5-AS1Q96IT6 56 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 EAF1Q96JC9 268 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-212ENST00000528930 CHCHD6Q9BRQ6 235 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 HDHD3Q9BSH5 251 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-212ENST00000528930 PECRQ9BY49 303 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 C11orf54Q9H0W9 315 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-212ENST00000528930 RIMS4Q9H426 269 aaPredicted RBP6.67□□□□□ -1.34
SSBP3-212ENST00000528930 PLSCR3Q9NRY6 295 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 TXNL4BQ9NX01 149 aaKnown RBP6.67□□□□□ -1.34
SSBP3-212ENST00000528930 JPT1Q9UK76 154 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 ADAM30Q9UKF2 790 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 RAB22AQ9UL26 194 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 SSR3Q9UNL2 185 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 KCNK7Q9Y2U2 307 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 MOB4Q9Y3A3 225 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 U3KQ87 197 aa6.67□□□□□ -1.34
SSBP3-212ENST00000528930 A0A0B4J203 849 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 KRBOX1C9JBD0 128 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 RAB27BO00194 218 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 FGF16O43320 207 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 LANCL1O43813 399 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 FBXO24O75426 580 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 CD83Q01151 205 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 TATDN3Q17R31 274 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 C10orf99Q6UWK7 81 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 TGIF2LXQ8IUE1 241 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 EIF4E3Q8N5X7 224 aaKnown RBP6.66□□□□□ -1.34
SSBP3-212ENST00000528930 OR4F17Q8NGA8 305 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 OR5AU1Q8NGC0 362 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 OR56B1Q8NGI3 324 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 RCHY1Q96PM5 261 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 FYTTD1Q96QD9 318 aaKnown RBP6.66□□□□□ -1.34
SSBP3-212ENST00000528930 OR4F4Q96R69 305 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 CITED4Q96RK1 184 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 CITED2Q99967 270 aaPredicted RBP6.66□□□□□ -1.34
SSBP3-212ENST00000528930 ABHD14AQ9BUJ0 271 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 Q9N2K0 584 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 COPZ2Q9P299 210 aa6.66□□□□□ -1.34
SSBP3-212ENST00000528930 LOC100506127A0A0U1RQW1 187 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 SMIM30A4D0T7 59 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 LINC01548A6NM66 108 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 ITGB1BP1O14713 200 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 TXNL1O43396 289 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 TMEM127O75204 238 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 RGS11O94810 467 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 MOSP00540 346 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 IGHG2P01859 326 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 SCTP09683 121 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 SLC2A2P11168 524 aaPredicted RBP6.65□□□□□ -1.34
SSBP3-212ENST00000528930 RAB14P61106 215 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 HLA-DRB3P79483 266 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 C9orf152Q5JTZ5 239 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 KRTAP5-3Q6L8H2 238 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 MZT2AQ6P582 158 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF833PQ6ZTB9 187 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 MOB1BQ7L9L4 216 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 CENPVQ7Z7K6 275 aaPredicted RBP6.65□□□□□ -1.34
SSBP3-212ENST00000528930 NDUFA11Q86Y39 141 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 Q8N9W7 124 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 UXS1Q8NBZ7 420 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 OR10R2Q8NGX6 335 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 OR2T10Q8NGZ9 312 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 IL1F10Q8WWZ1 152 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 PTX4Q96A99 478 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 R3HDM4Q96D70 268 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 NABP2Q9BQ15 211 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms