RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 LRFN3Q9BTN0 628 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 CHCHD2Q9Y6H1 151 aaPredicted RBP15.24■□□□□ 0.03
LTBP3-210ENST00000528516 E9PLN8 166 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 COX5AP20674 150 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 TMEM251Q8N6I4 163 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 OR2M7Q8NG81 312 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 S1PR3Q99500 378 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 PIGBOS1A0A0B4J2F0 54 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 PAGE4O60829 102 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 ABLIM2Q6H8Q1 611 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 SIGLECL1Q8N7X8 197 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 ZNF71Q9NQZ8 489 aaPredicted RBP15.23■□□□□ 0.03
LTBP3-210ENST00000528516 ZFP36L1Q07352 338 aaKnown RBP15.23■□□□□ 0.03
LTBP3-210ENST00000528516 OR5AU1Q8NGC0 362 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 LEAP2Q969E1 77 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 SPOCK3Q9BQ16 436 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 TMEM106BQ9NUM4 274 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 OR1A1Q9P1Q5 309 aa15.23■□□□□ 0.03
LTBP3-210ENST00000528516 LOC102724200A0A096LPH7 203 aaPredicted RBP15.22■□□□□ 0.03
LTBP3-210ENST00000528516 KIR2DL5BA0A0G2JN68 375 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 KIR2DL5BA0A0G2JPC4 375 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 TCL1AP56279 114 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 ACTL10Q5JWF8 245 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 NUFIP2Q7Z417 695 aaKnown RBP15.22■□□□□ 0.03
LTBP3-210ENST00000528516 KIR2DL5AQ8N109 375 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 RBMXL3Q8N7X1 1067 aaKnown RBP15.22■□□□□ 0.03
LTBP3-210ENST00000528516 ZNF439Q8NDP4 499 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 SLC35E1Q96K37 410 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 CLDN16Q9Y5I7 305 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 PCNX3Q9H6A9 2034 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 IL3RAP26951 378 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 COA6Q5JTJ3 125 aaKnown RBP15.22■□□□□ 0.03
LTBP3-210ENST00000528516 PMS2CLQ68D20 193 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 UBALD2Q8IYN6 164 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 SGMS2Q8NHU3 365 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 FGFBP3Q8TAT2 258 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 RNASE8Q8TDE3 154 aaKnown RBP15.22■□□□□ 0.03
LTBP3-210ENST00000528516 CLPSP04118 112 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 CRISP2P16562 243 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 GATAD1Q8WUU5 269 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 LYZL4Q96KX0 146 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 IMMP2LQ96T52 175 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 ZFP30Q9Y2G7 519 aa15.22■□□□□ 0.03
LTBP3-210ENST00000528516 A0A1W2PRD5 423 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 A0A1W2PRF3 423 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 A0A1W2PRM7 423 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 OR52L2PQ8NGH6 319 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 A0A0U1RQV5 110 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 COX6A1P12074 109 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 SLC35B1P78383 322 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 VAMP3Q15836 100 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 ZNF818PQ6ZRF7 136 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 OR10G9Q8NGN4 311 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 OR10G7Q8NGN6 311 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 WNT5BQ9H1J7 359 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 ZNF586Q9NXT0 402 aa15.21■□□□□ 0.03
LTBP3-210ENST00000528516 RHBDL1O75783 438 aa15.21■□□□□ 0.02
LTBP3-210ENST00000528516 TNFSF13O75888 250 aa15.21■□□□□ 0.02
LTBP3-210ENST00000528516 HINT1P49773 126 aaPredicted RBP15.21■□□□□ 0.02
LTBP3-210ENST00000528516 HES1Q14469 280 aa15.21■□□□□ 0.02
LTBP3-210ENST00000528516 PROCRQ9UNN8 238 aa15.21■□□□□ 0.02
LTBP3-210ENST00000528516 CFAP54Q96N23 3096 aa15.21■□□□□ 0.02
LTBP3-210ENST00000528516 TMEM30CPA0ZSE6 113 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 NKX2-8O15522 239 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 GALR2O43603 387 aaPredicted RBP15.2■□□□□ 0.02
LTBP3-210ENST00000528516 NUPR1O60356 82 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 UMODP07911 640 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 PMCHP20382 165 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 SIGLEC12Q96PQ1 595 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 TTTY12Q9BZ98 90 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 PCDH15Q96QU1 1955 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 CCL17Q92583 94 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 NEIL1Q96FI4 390 aaPredicted RBP15.2■□□□□ 0.02
LTBP3-210ENST00000528516 KLK10O43240 276 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 EIF3IQ13347 325 aaKnown RBP15.2■□□□□ 0.02
LTBP3-210ENST00000528516 ZNF726P1Q15940 193 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 OR1L6Q8NGR2 347 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 DNASE2BQ8WZ79 361 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 RAB40CQ96S21 281 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 DECR2Q9NUI1 292 aa15.2■□□□□ 0.02
LTBP3-210ENST00000528516 TRAV1-1A0A0B4J248 108 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 IGHV3-48P01763 117 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 STARD4Q96DR4 205 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 OR2W1Q9Y3N9 320 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 ATP23Q9Y6H3 246 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 USP34Q70CQ2 3546 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 MED13Q9UHV7 2174 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 SRP14P37108 136 aaKnown RBP15.19■□□□□ 0.02
LTBP3-210ENST00000528516 RND1Q92730 232 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 OR4C12Q96R67 309 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 REG1BP48304 166 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 VKORC1L1Q8N0U8 176 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 ZADH2Q8N4Q0 377 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 SARAFQ96BY9 339 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 NCOR2Q9Y618 2525 aa15.19■□□□□ 0.02
LTBP3-210ENST00000528516 CDKN1AP38936 164 aa15.18■□□□□ 0.02
LTBP3-210ENST00000528516 SPATA45Q537H7 98 aa15.18■□□□□ 0.02
LTBP3-210ENST00000528516 NFAM1Q8NET5 270 aaPredicted RBP15.18■□□□□ 0.02
LTBP3-210ENST00000528516 SF3B5Q9BWJ5 86 aaKnown RBP15.18■□□□□ 0.02
LTBP3-210ENST00000528516 MRPL13Q9BYD1 178 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms