RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 FAM24BQ8N5W8 94 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.72□□□□□ -0.37
USH1C-207ENST00000527720 Q8TCH9 128 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 C2CD4CQ8TF44 421 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 IFI27L2Q9H2X8 130 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 GCM1Q9NP62 436 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 SLC39A9Q9NUM3 307 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 VAX2Q9UIW0 290 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 DYSFO75923 2080 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 ZFP92A6NM28 416 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 M0R1X1 148 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 FBP1P09467 338 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 CEBPGP53567 150 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 RPP30P78346 268 aaKnown RBP12.72□□□□□ -0.37
USH1C-207ENST00000527720 TNFAIP6P98066 277 aaPredicted RBP12.72□□□□□ -0.37
USH1C-207ENST00000527720 FAM27E3Q08E93 113 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 PNRC1Q12796 327 aaPredicted RBP12.72□□□□□ -0.37
USH1C-207ENST00000527720 RBMS3Q6XE24 437 aaKnown RBP12.72□□□□□ -0.37
USH1C-207ENST00000527720 FAM234AQ9H0X4 552 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 SOX15O60248 233 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 IGHV1-46P01743 117 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 CD55P08174 381 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 MDKP21741 143 aaPredicted RBP12.71□□□□□ -0.37
USH1C-207ENST00000527720 FGF7P21781 194 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 ELLP55199 621 aaPredicted RBP12.71□□□□□ -0.37
USH1C-207ENST00000527720 LINC00205P59089 165 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 SPCS3P61009 180 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 ERVK-16P61578 105 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 CTAG1AP78358 180 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 TMEM30BQ3MIR4 351 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 STUMQ69YW2 141 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 C1QL4Q86Z23 238 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 RPP25LQ8N5L8 163 aaKnown RBP12.71□□□□□ -0.37
USH1C-207ENST00000527720 QTRT1Q9BXR0 403 aaKnown RBP12.71□□□□□ -0.37
USH1C-207ENST00000527720 ELOVL5Q9NYP7 299 aa12.71□□□□□ -0.37
USH1C-207ENST00000527720 KBTBD11-OT1A0A1B0GTJ5 212 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 CTXND1A0A1B0GTU2 59 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 C17orf112F2Z3M2 114 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 OR9G9P0C7N8 305 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 NQO2P16083 231 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 ZNF134P52741 427 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 C17orf58Q2M2W7 97 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 PRAMEF5Q5TYX0 476 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 SSX8Q7RTT4 187 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 OR4A16Q8NH70 328 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 CA5BP1Q8WTZ4 195 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 S1PR3Q99500 378 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 GFOD1Q9NXC2 390 aa12.71□□□□□ -0.38
USH1C-207ENST00000527720 ASPMQ8IZT6 3477 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 TRGV10A0A0A0MS01 117 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 PRRG2O14669 202 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 BMP5P22003 454 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 FGF8P55075 233 aaPredicted RBP12.7□□□□□ -0.38
USH1C-207ENST00000527720 RAB11AP62491 216 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 ACSM6Q6P461 480 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 ZNF709Q8N972 641 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 DDB2Q92466 427 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 LHX4Q969G2 390 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 ZNF251Q9BRH9 671 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 NPCDR1Q9BY65 106 aa12.7□□□□□ -0.38
USH1C-207ENST00000527720 TET2Q6N021 2002 aaPredicted RBP12.7□□□□□ -0.38
USH1C-207ENST00000527720 C15orf62A8K5M9 175 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 IFNA17P01571 189 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 AKR1D1P51857 326 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 TMEM108Q6UXF1 575 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 HEPN1Q6WQI6 88 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 OR4S2Q8NH73 311 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 LINC00574Q9H8X3 128 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 hCG_1809904A0A1W2PP81 198 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 A0A1W2PR64 198 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 A0A1W2PRV1 198 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 IGKV1D-33P01593 117 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 IGKV1-33P01594 117 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 S100A6P06703 90 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 TDGF1P3P51864 188 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 RPL39P5Q59GN2 51 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 DIRC2Q96SL1 478 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 GGACTQ9BVM4 153 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 TMEM242Q9NWH2 141 aa12.69□□□□□ -0.38
USH1C-207ENST00000527720 C5orf52A6NGY3 159 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 CCKARP32238 428 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 TEX36Q5VZQ5 186 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 ZNF788Q6ZQV5 615 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 C22orf34Q6ZV56 151 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 DOLPP1Q86YN1 238 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 OR10G9Q8NGN4 311 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 OR10G7Q8NGN6 311 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 CORO2AQ92828 525 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 PLPPR2Q96GM1 343 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 ADTRPQ96IZ2 230 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 GAFA1Q96PS6 74 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 ACTR3CQ9C0K3 210 aaPredicted RBP12.68□□□□□ -0.38
USH1C-207ENST00000527720 PLCE1Q9P212 2302 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 ZNF729A6NN14 1252 aaPredicted RBP12.68□□□□□ -0.38
USH1C-207ENST00000527720 C16orf97H3BN30 126 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 MPDU1O75352 247 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 IRF2P14316 349 aa12.68□□□□□ -0.38
USH1C-207ENST00000527720 RPL35P42766 123 aaKnown RBP12.68□□□□□ -0.38
USH1C-207ENST00000527720 THBS3P49746 956 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms