RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 EDDM3BP56851 147 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 TAS2R20P59543 309 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 GNG2P59768 71 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 LMO4P61968 165 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 GNB2P62879 340 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 MRPS15P82914 257 aaKnown RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 ZNF45Q02386 682 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 EDDM3AQ14507 147 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 SPANXN2Q5MJ10 180 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 TMEM69Q5SWH9 247 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 HACD4Q5VWC8 232 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 WDR25Q64LD2 544 aaPredicted RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 PYHIN1Q6K0P9 492 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 CNIH2Q6PI25 160 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 FAM131AQ6UXB0 335 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 BAIAP2L2Q6UXY1 529 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 ZNF841Q6ZN19 808 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 C6orf201Q7Z4U5 140 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 STHQ8IWL8 128 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 FAM216BQ8N7L0 139 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 ZNF565Q8N9K5 539 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 ASCC1Q8N9N2 400 aaKnown RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 OR4S1Q8NGB4 309 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 OR4M1Q8NGD0 313 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 CLDND2Q8NHS1 167 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 S100ZQ8WXG8 99 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 H1FXQ92522 213 aaKnown RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 RAB40CQ96S21 281 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 CMSS1Q9BQ75 279 aaKnown RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 SULT4A1Q9BR01 284 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 ALKBH7Q9BT30 221 aaPredicted RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 REG4Q9BYZ8 158 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 CHST6Q9GZX3 395 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 PPA2Q9H2U2 334 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 RIMS4Q9H426 269 aaPredicted RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 AUNIPQ9H7T9 357 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 ZNF581Q9P0T4 197 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 CLN8Q9UBY8 286 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 AK3Q9UIJ7 227 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 TRAPPC2LQ9UL33 140 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 YLPM1P49750 1951 aaKnown RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 HRNRQ86YZ3 2850 aaPredicted RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 LOC105371242A0A075B767 164 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 MEIKINA0A087WXM9 373 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 A0A087X0K7 114 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 A0A0G2JMP0 313 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 A0A0X1KG70 313 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 KIR2DS1A0A191URI9 304 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 A0A1B0GW55 424 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 hADV38S2A0JD32 116 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 TMEM30CPA0ZSE6 113 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 MEX3AA1L020 520 aaKnown RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 TMEM235A6NFC5 223 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 SERPINE3A8MV23 424 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 B4DSR2 109 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 SULT1C2O00338 296 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 MFNGO00587 321 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 PHF1O43189 567 aaPredicted RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 RBBP9O75884 186 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 IGHV2-5P01817 119 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 CSN2P05814 226 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DUX4L2P0CJ85 424 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DUX4L3P0CJ86 424 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DUX4L4P0CJ87 422 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DUX4L5P0CJ88 424 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DUX4L6P0CJ89 424 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DUX4L7P0CJ90 424 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 ETV6P41212 452 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 CBX5P45973 191 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 RPL31P62899 125 aaKnown RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 LCN2P80188 198 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 MRPS10P82664 201 aaKnown RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 MEF2CQ06413 473 aaPredicted RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 LOXL1Q08397 574 aaPredicted RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 MADCAM1Q13477 382 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 ATXN7L3Q14CW9 347 aaPredicted RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 PYDC2Q56P42 97 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 OLFML2AQ68BL7 652 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 CRYBG3Q68DQ2 2970 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DUX4L9Q6RFH8 374 aaPredicted RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 ZNF600Q6ZNG1 722 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 ZNF497Q6ZNH5 498 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 SNX29P2Q8IUI4 249 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 FGFRL1Q8N441 504 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 OR4M2Q8NGB6 313 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 OR4K15Q8NH41 348 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 PLPPR1Q8TBJ4 325 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 CCDC107Q8WV48 283 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DYRK2Q92630 601 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 LITAFQ99732 161 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 SOSTQ9BQB4 213 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DCTN5Q9BTE1 182 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 ST6GALNAC5Q9BVH7 336 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 NUDT15Q9NV35 164 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 KCNIP1Q9NZI2 227 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 CTSZQ9UBR2 303 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 DUX4Q9UBX2 424 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 KIF25Q9UIL4 384 aa3.6□□□□□ -1.83
USP48-211ENST00000526044 ELF5Q9UKW6 265 aaPredicted RBP3.6□□□□□ -1.83
USP48-211ENST00000526044 USF3Q68DE3 2245 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms