RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 ST8SIA3O43173 380 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 RAMP1O60894 148 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 NPIPB7O75200 414 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 PITX3O75364 302 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ACTL6BO94805 426 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 NDUFB2O95178 105 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 NUDT3O95989 172 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 NRASP01111 189 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 KRASP01116 189 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 HLA-DRB1P01911 266 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 PFN1P07737 140 aaKnown RBP4.25□□□□□ -1.73
CD44-218ENST00000525469 ATP1B2P14415 290 aaPredicted RBP4.25□□□□□ -1.73
CD44-218ENST00000525469 GYPEP15421 78 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 SELEP16581 610 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 SRD5A1P18405 259 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 DUSP1P28562 367 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 PRLHRP49683 370 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 GPM6AP51674 278 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 TAS2R30P59541 319 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 TBPL1P62380 186 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 SEC11AP67812 179 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 RAE1P78406 368 aaKnown RBP4.25□□□□□ -1.73
CD44-218ENST00000525469 SSBP2P81877 361 aaPredicted RBP4.25□□□□□ -1.73
CD44-218ENST00000525469 SERF2P84101 59 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 Q0VG73 95 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 RAB32Q13637 225 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ZNF74Q16587 644 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 IAH1Q2TAA2 248 aaPredicted RBP4.25□□□□□ -1.73
CD44-218ENST00000525469 SPATA45Q537H7 98 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 OR10J3Q5JRS4 329 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 TPTE2P1Q5T6R2 138 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 FA2HQ7L5A8 372 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ZNF627Q7L945 461 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 TMEM144Q7Z5S9 345 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 TMEM217Q8N7C4 229 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ZNF676Q8N7Q3 588 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 LRTM2Q8N967 370 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ZFP62Q8NB50 900 aaPredicted RBP4.25□□□□□ -1.73
CD44-218ENST00000525469 OR51G1Q8NGK1 321 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 OR5AR1Q8NGP9 310 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ZNF563Q8TA94 476 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 FLVCR1-AS1Q8TAF5 88 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ZNF519Q8TB69 540 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 STARD4Q96DR4 205 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 MRAP2Q96G30 205 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 SDSLQ96GA7 329 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ZNF479Q96JC4 524 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 TBX5Q99593 518 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 MCHR1Q99705 422 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 TIMP4Q99727 224 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 SAMD10Q9BYL1 202 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 CHST6Q9GZX3 395 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 MTHFD2LQ9H903 347 aaPredicted RBP4.25□□□□□ -1.73
CD44-218ENST00000525469 SYNPO2LQ9H987 977 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 MANBALQ9NQG1 85 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 TMEM38BQ9NVV0 291 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 FAM206AQ9NX38 181 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 CLEC5AQ9NY25 188 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 PLAGL1Q9UM63 463 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ICAM5Q9UMF0 924 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 LAMP3Q9UQV4 416 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 VSIG4Q9Y279 399 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 TMED7Q9Y3B3 224 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 CADP27708 2225 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 RAI1Q7Z5J4 1906 aaPredicted RBP4.25□□□□□ -1.73
CD44-218ENST00000525469 MALRD1Q5VYJ5 2156 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 MED12LQ86YW9 2145 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 SAA2-SAA4A0A096LPE2 208 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 A0A0U1RQK1 487 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 A0A1W2PPR1 153 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 ZNF320A2RRD8 509 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 AQP7P3A6NL99 342 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 M0R1X1 148 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 ZNF253O75346 499 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 RBMXL2O75526 392 aaKnown RBP4.24□□□□□ -1.73
CD44-218ENST00000525469 KBTBD11O94819 623 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 SLC2A10O95528 541 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 CDS2O95674 445 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 CH25HO95992 272 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 IFNA5P01569 189 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 DBIP07108 87 aaKnown RBP4.24□□□□□ -1.73
CD44-218ENST00000525469 IGLC2P0DOY2 106 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 IGLC3P0DOY3 106 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 BCL2P10415 239 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 EGR1P18146 543 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 FUT3P21217 361 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 TUBG1P23258 451 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 UCP1P25874 307 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 TSPOP30536 169 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 REG1BP48304 166 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 GNG4P50150 75 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 SLC25A1P53007 311 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 RAB38P57729 211 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 YPEL3P61236 119 aaPredicted RBP4.24□□□□□ -1.73
CD44-218ENST00000525469 PPP1CBP62140 327 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 RPL24P83731 157 aaKnown RBP4.24□□□□□ -1.73
CD44-218ENST00000525469 SLAQ13239 276 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 MSMO1Q15800 293 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 ARHGAP11BQ3KRB8 267 aa4.24□□□□□ -1.73
CD44-218ENST00000525469 TP53I3Q53FA7 332 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms