RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 AIPO00170 330 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 REM1O75628 298 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 SCO1O75880 301 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 ARL6IP5O75915 188 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 LDOC1O95751 146 aaPredicted RBP3.63□□□□□ -1.83
SKP1-213ENST00000524288 RPN2P04844 631 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 GLAP06280 429 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 ATF1P18846 271 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 CXCL2P19875 107 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 TEAD1P28347 426 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 MYCNOSP40205 109 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 BLVRAP53004 296 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 TAS2R41P59536 307 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 CDK5R1Q15078 307 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 SLC25A35Q3KQZ1 300 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 AVPI1Q5T686 147 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 NTM-AS1Q6ZSK4 140 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 LGI3Q8N145 548 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 OR2T35Q8NGX2 323 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 THEM6Q8WUY1 208 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 RAD51AP1Q96B01 352 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 FLYWCH2Q96CP2 140 aaKnown RBP3.63□□□□□ -1.83
SKP1-213ENST00000524288 SMIM19Q96E16 107 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 MSANTD3Q96H12 275 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 COX14Q96I36 57 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 LINC00052Q96N35 136 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 PRSS27Q9BQR3 290 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 AGMATQ9BSE5 352 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 GAL3ST2Q9H3Q3 398 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 HRASLSQ9HDD0 168 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 C12orf4Q9NQ89 552 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 CES1P1Q9UKY3 287 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 SCML1Q9UN30 329 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 ZNF443Q9Y2A4 671 aaPredicted RBP3.63□□□□□ -1.83
SKP1-213ENST00000524288 SLC35A3Q9Y2D2 325 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 PRELID3BQ9Y3B1 194 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 MTCH2Q9Y6C9 303 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 TRPM6Q9BX84 2022 aa3.63□□□□□ -1.83
SKP1-213ENST00000524288 A0A1W2PRG6 482 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 DAPL1A0PJW8 107 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 TRAPPC13A5PLN9 417 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 ZNF879B4DU55 563 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 MCRIP1C9JLW8 97 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 ATP6V1G2-DDX39BF2Z307 99 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 KPNA3O00505 521 aaPredicted RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 CDC42EP2O14613 210 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 PDCD5O14737 125 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 RTL8CO15255 209 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 NDUFB6O95139 128 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 RCBTB2O95199 551 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 MT-ND4P03905 459 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 HMGN2P05204 90 aaKnown RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 TACSTD2P09758 323 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 UBBP0CG47 229 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 GABRA1P14867 456 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 IL9P15248 144 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 CSRP1P21291 193 aaKnown RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 S100A11P31949 105 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 GPR4P46093 362 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 OR10A3P58181 314 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 B2MP61769 119 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 TSPAN5P62079 268 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 RPS11P62280 158 aaKnown RBP eCLIP3.62□□□□□ -1.83
SKP1-213ENST00000524288 UBA52P62987 128 aaKnown RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 S100A12P80511 92 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 FLI1Q01543 452 aaPredicted RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 SSBP1Q04837 148 aaKnown RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 INSL4Q14641 139 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 ARHGAP11BQ3KRB8 267 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 MPV17L2Q567V2 206 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 SLC25A25Q6KCM7 469 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 SLC48A1Q6P1K1 146 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 RPL22L1Q6P5R6 122 aaKnown RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 TRAPPC5Q8IUR0 188 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 ZNF645Q8N7E2 425 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 OR52L1Q8NGH7 329 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 OR5D16Q8NGK9 328 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 OR6K3Q8NGY3 331 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 OR6N1Q8NGY5 312 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 LGALS14Q8TCE9 139 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 MITD1Q8WV92 249 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 OR8D1Q8WZ84 308 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 OTUB2Q96DC9 234 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 MRPL48Q96GC5 212 aaKnown RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 OR7D2Q96RA2 312 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 CDX2Q99626 313 aaPredicted RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 TMEM243Q9BU79 118 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 ZNF426Q9BUY5 554 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 FGF23Q9GZV9 251 aaPredicted RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 C1orf198Q9H425 327 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 METTL17Q9H7H0 456 aaPredicted RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 ZNF430Q9H8G1 570 aaPredicted RBP3.62□□□□□ -1.83
SKP1-213ENST00000524288 ZNF355PQ9NSJ1 428 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 C14orf105Q9NVL8 296 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 OPN4Q9UHM6 478 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 SIGLEC7Q9Y286 467 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 C2orf16Q68DN1 1984 aa3.62□□□□□ -1.83
SKP1-213ENST00000524288 FANCMQ8IYD8 2048 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 IGHV3OR16-9A0A0B4J2B5 98 aa3.61□□□□□ -1.83
SKP1-213ENST00000524288 TMEM223A0PJW6 202 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms