RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 FAM209BQ5JX69 171 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 CDPF1Q6NVV7 123 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 CD177Q8N6Q3 437 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 ZNF709Q8N972 641 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 FDCSPQ8NFU4 85 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 OR10A7Q8NGE5 316 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 OR4F5Q8NH21 305 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 OR4F4Q96R69 305 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 PARLQ9H300 379 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 WASF3Q9UPY6 502 aa9.23□□□□□ -0.93
HDAC9-228ENST00000524023 INTS1Q8N201 2190 aaKnown RBP9.23□□□□□ -0.93
HDAC9-228ENST00000524023 AQP7O14520 342 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 IGLV1-44P01699 117 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 PAX5Q02548 391 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 MBNL2Q5VZF2 373 aaKnown RBP9.22□□□□□ -0.93
HDAC9-228ENST00000524023 TRAT1Q6PIZ9 186 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 LRRC29Q8WV35 223 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 R3HDM4Q96D70 268 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 PYGO2Q9BRQ0 406 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 QTRT1Q9BXR0 403 aaKnown RBP9.22□□□□□ -0.93
HDAC9-228ENST00000524023 SRD5A3Q9H8P0 318 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 ASPMQ8IZT6 3477 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 TRBV23-1A0A0A0MS06 115 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 IGHV2OR16-5A0A0B4J2B6 119 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 C15orf62A8K5M9 175 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 C17orf112F2Z3M2 114 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 PROP1O75360 226 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 OR9G9P0C7N8 305 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 PRDX2P32119 198 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 DUTP33316 252 aaKnown RBP9.22□□□□□ -0.93
HDAC9-228ENST00000524023 SRSF6Q13247 344 aaKnown RBP9.22□□□□□ -0.93
HDAC9-228ENST00000524023 EDDM3AQ14507 147 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 LTC4SQ16873 150 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 Q8N7P7 452 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 OR51G1Q8NGK1 321 aa9.22□□□□□ -0.93
HDAC9-228ENST00000524023 IGHV1-18A0A0C4DH31 117 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 A0A1B0GWJ7 208 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 PRR33A8MZF0 331 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 PAGE4O60829 102 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 DEFA4P12838 97 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 GPR12P47775 334 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 TRIP6Q15654 476 aaKnown RBP9.21□□□□□ -0.94
HDAC9-228ENST00000524023 AARDQ4LEZ3 155 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 ZNF383Q8NA42 475 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 NECAP1Q8NC96 275 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 OR4X1Q8NH49 305 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 PLSCR4Q9NRQ2 329 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 OR6C3Q9NZP0 311 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 CFAP47Q6ZTR5 3102 aa9.21□□□□□ -0.94
HDAC9-228ENST00000524023 H7BYZ3 331 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 FCGR3BO75015 233 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 FABP4P15090 132 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 EGR1P18146 543 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 CDC34P49427 236 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-228ENST00000524023 ACOT6Q3I5F7 207 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-228ENST00000524023 IGFL2Q6UWQ7 119 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 LURAP1LQ8IV03 231 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 SARAFQ96BY9 339 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 NEIL1Q96FI4 390 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-228ENST00000524023 SNX22Q96L94 193 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 DIRC2Q96SL1 478 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 PITPNC1Q9UKF7 332 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 WDR83OSQ9Y284 106 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 ZNF729A6NN14 1252 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-228ENST00000524023 FAM90A9PA6NNJ1 464 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 HPRT1P00492 218 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 RD3LP0DJH9 198 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 GZMHP20718 246 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 CD82P27701 267 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 CD1BP29016 333 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 GALR1P47211 349 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 MZT1Q08AG7 82 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 RTP5Q14D33 572 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 MORN2Q502X0 79 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 TGIF2LYQ8IUE0 185 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 OR2Z1Q8NG97 314 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 PLPPR2Q96GM1 343 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 OR5B12Q96R08 314 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 GAB2Q9UQC2 676 aa9.2□□□□□ -0.94
HDAC9-228ENST00000524023 IGKV1D-17A0A075B6S4 117 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 SMCO3A2RU48 225 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 SRRM5B3KS81 715 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 GYPAP02724 150 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 PRAMEF5Q5TYX0 476 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 FAM90A1Q86YD7 464 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 ELOVL1Q9BW60 279 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 OPN3Q9H1Y3 402 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-228ENST00000524023 ZNF71Q9NQZ8 489 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-228ENST00000524023 GNG12Q9UBI6 72 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 JPT1Q9UK76 154 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 TET2Q6N021 2002 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-228ENST00000524023 TRAV17A0A0B4J275 112 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 C11orf94C9JXX5 98 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 YPEL1O60688 119 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 TNFSF13O75888 250 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 VENTXO95231 258 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 LY86O95711 162 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 HRASP01112 189 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 HIST1H1BP16401 226 aaKnown RBP9.19□□□□□ -0.94
HDAC9-228ENST00000524023 NPPCP23582 126 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms