RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 AKAP14Q86UN6 197 aa9.92□□□□□ -0.82
VEGFA-225ENST00000523950 NDUFA11Q86Y39 141 aa9.92□□□□□ -0.82
VEGFA-225ENST00000523950 LAX1Q8IWV1 398 aa9.92□□□□□ -0.82
VEGFA-225ENST00000523950 STPG2Q8N412 459 aa9.92□□□□□ -0.82
VEGFA-225ENST00000523950 DDB2Q92466 427 aa9.92□□□□□ -0.82
VEGFA-225ENST00000523950 C5orf30Q96GV9 206 aa9.92□□□□□ -0.82
VEGFA-225ENST00000523950 RITA1Q96K30 269 aa9.92□□□□□ -0.82
VEGFA-225ENST00000523950 PRELID3BQ9Y3B1 194 aa9.92□□□□□ -0.82
VEGFA-225ENST00000523950 BOLA2-SMG1P6H3BVE0 249 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 CTDSP2O14595 271 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 IGLV2-14P01704 120 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 IGKV1-16P04430 117 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 CD28P10747 220 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 TBPP20226 339 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 CNTFRP26992 372 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 EIF2B2P49770 351 aaKnown RBP9.91□□□□□ -0.82
VEGFA-225ENST00000523950 HERV-K104P61576 105 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 RPS16P62249 146 aaKnown RBP9.91□□□□□ -0.82
VEGFA-225ENST00000523950 CD83Q01151 205 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 SSBP1Q04837 148 aaKnown RBP9.91□□□□□ -0.82
VEGFA-225ENST00000523950 ASAH1Q13510 395 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 PLGLAQ15195 96 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 TMEM177Q53S58 311 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 ZNF660Q6AZW8 331 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-225ENST00000523950 PYHIN1Q6K0P9 492 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 BVESQ8NE79 360 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 OSR1Q8TAX0 266 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-225ENST00000523950 HSPB9Q9BQS6 159 aa9.91□□□□□ -0.82
VEGFA-225ENST00000523950 IGHV7-81A0A0B4J1V7 117 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 GABARAPH6UMI1 98 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 CTDSPLO15194 276 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 SHOXO15266 292 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 FCER2P06734 321 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 CSF1P09603 554 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 VDAC1P21796 283 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 HRH1P35367 487 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 KIR2DS2P43631 304 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 RFX2P48378 723 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 LINC00205P59089 165 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 EIF4EBP1Q13541 118 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-225ENST00000523950 PSG5Q15238 335 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 VAX1Q5SQQ9 334 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 OR6F1Q8NGZ6 308 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 SECTM1Q8WVN6 248 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 FCAMRQ8WWV6 532 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 MOB3AQ96BX8 217 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 DIRAS2Q96HU8 199 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 HARBI1Q96MB7 349 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 ABHD1Q96SE0 405 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 CITED2Q99967 270 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-225ENST00000523950 SRRQ9GZT4 340 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 SLC5A7Q9GZV3 580 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 OR51J1Q9H342 316 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 FBXL15Q9H469 300 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 METTL1Q9UBP6 276 aaKnown RBP9.9□□□□□ -0.82
VEGFA-225ENST00000523950 MTFP1Q9UDX5 166 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 TSSC4Q9Y5U2 329 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-225ENST00000523950 V9GYH0 126 aa9.9□□□□□ -0.82
VEGFA-225ENST00000523950 LINC00473A8K010 186 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 PMP2P02689 132 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 HLA-DMAP28067 261 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 FXYD4P59646 89 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 CATR1Q13166 79 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 NDUFA5Q16718 116 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 TEX38Q6PEX7 206 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 TREML4Q6UXN2 200 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 C11orf44Q8N8P7 122 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 OR52I2Q8NH67 350 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 OR4S2Q8NH73 311 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 NOL4LQ96MY1 436 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-225ENST00000523950 ZNF2Q9BSG1 426 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-225ENST00000523950 CCL28Q9NRJ3 127 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 ZFP57Q9NU63 452 aa9.89□□□□□ -0.83
VEGFA-225ENST00000523950 TCRBV4S1A1TA0A5B7 111 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 FABP12A6NFH5 140 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 LINC01548A6NM66 108 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 RBFOX2O43251 390 aaKnown RBP eCLIP9.88□□□□□ -0.835e-9■□□□□ 10.6
VEGFA-225ENST00000523950 SLC25A17O43808 307 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 CREBL2O60519 120 aaPredicted RBP9.88□□□□□ -0.83
VEGFA-225ENST00000523950 CRYZL1O95825 349 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 IGLV2-23P01705 113 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 CRYGBP07316 175 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 IL7P13232 177 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 SLC6A1P30531 599 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 CRIP2P52943 208 aaPredicted RBP9.88□□□□□ -0.83
VEGFA-225ENST00000523950 TAS2R19P59542 299 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 UBE2KP61086 200 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 TSPAN5P62079 268 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 CFHR3Q02985 330 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 IL18Q14116 193 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 VMA21Q3ZAQ7 101 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 MZT2BQ6NZ67 158 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 LPCAT3Q6P1A2 487 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 ZNF562Q6V9R5 426 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 PPP1R27Q86WC6 154 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 TMEM17Q86X19 198 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 ARRDC1Q8N5I2 433 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 TCTEX1D1Q8N7M0 179 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 TEX45Q8NA69 505 aa9.88□□□□□ -0.83
VEGFA-225ENST00000523950 TMEM229BQ8NBD8 167 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms