RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 POMT1Q9Y6A1 747 aa19.34■□□□□ 0.69
PVT1-212ENST00000521951 C3orf85A0A1B0GTC6 90 aa19.33■□□□□ 0.68
PVT1-212ENST00000521951 RAMP3O60896 148 aa19.33■□□□□ 0.68
PVT1-212ENST00000521951 TMEM11P17152 192 aa19.33■□□□□ 0.68
PVT1-212ENST00000521951 SLC9A3R2Q15599 337 aa19.33■□□□□ 0.68
PVT1-212ENST00000521951 Q8N6K4 173 aa19.33■□□□□ 0.68
PVT1-212ENST00000521951 TCTEX1D1Q8N7M0 179 aa19.33■□□□□ 0.68
PVT1-212ENST00000521951 FLYWCH2Q96CP2 140 aaKnown RBP19.33■□□□□ 0.68
PVT1-212ENST00000521951 DUX5Q96PT3 197 aa19.33■□□□□ 0.68
PVT1-212ENST00000521951 NIPBLQ6KC79 2804 aaeCLIP19.32■□□□□ 0.682e-6■■■■□ 25.1
PVT1-212ENST00000521951 DNAJC9-AS1A6NH13 148 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 CRYZL1O95825 349 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 PTTG1O95997 202 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 H2AFB2P0C5Z0 115 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 SPNP16150 400 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 ANXA7P20073 488 aaKnown RBP19.32■□□□□ 0.68
PVT1-212ENST00000521951 TAS2R31P59538 309 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 HILS1P60008 231 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 DHODHQ02127 395 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 CBX3Q13185 183 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 TMEM177Q53S58 311 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 TMEM128Q5BJH2 165 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 DHRS7BQ6IAN0 325 aaPredicted RBP19.32■□□□□ 0.68
PVT1-212ENST00000521951 TMEM219Q86XT9 240 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 SGPP2Q8IWX5 399 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 OR4C13Q8NGP0 309 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 OR4S2Q8NH73 311 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 TP53RKQ96S44 253 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 PITPNC1Q9UKF7 332 aa19.32■□□□□ 0.68
PVT1-212ENST00000521951 RBFOX2O43251 390 aaKnown RBP eCLIP19.31■□□□□ 0.682e-12■■■■□ 24.8
PVT1-212ENST00000521951 RPS16P62249 146 aaKnown RBP19.31■□□□□ 0.68
PVT1-212ENST00000521951 SUPT4H1P63272 117 aaKnown RBP19.31■□□□□ 0.68
PVT1-212ENST00000521951 SP6Q3SY56 376 aa19.31■□□□□ 0.68
PVT1-212ENST00000521951 ZNF585BQ52M93 769 aa19.31■□□□□ 0.68
PVT1-212ENST00000521951 CD300LFQ8TDQ1 290 aa19.31■□□□□ 0.68
PVT1-212ENST00000521951 VPREB3Q9UKI3 123 aa19.31■□□□□ 0.68
PVT1-212ENST00000521951 H0Y980 276 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 PEX14O75381 377 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 VSIG10L2P0DP72 767 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 LPAR6P43657 344 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 PLET1Q6UQ28 207 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 RNF5Q99942 180 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 CHIAQ9BZP6 476 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 BEX1Q9HBH7 125 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 FAM212BQ9NTI7 297 aaPredicted RBP19.3■□□□□ 0.68
PVT1-212ENST00000521951 KCNIP3Q9Y2W7 256 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 OR5AC1P0C628 307 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 CNTFRP26992 372 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 F2RL1P55085 397 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 UBE2MP61081 183 aaKnown RBP19.3■□□□□ 0.68
PVT1-212ENST00000521951 RGS21Q2M5E4 152 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 GALNT14Q96FL9 552 aa19.3■□□□□ 0.68
PVT1-212ENST00000521951 RBM14Q96PK6 669 aaKnown RBP19.3■□□□□ 0.68
PVT1-212ENST00000521951 ALX4Q9H161 411 aaPredicted RBP19.3■□□□□ 0.68
PVT1-212ENST00000521951 SHOXO15266 292 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 B3GALNT1O75752 331 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 RAB25P57735 213 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 PPP1R1AQ13522 171 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 OSR1Q8TAX0 266 aaPredicted RBP19.29■□□□□ 0.68
PVT1-212ENST00000521951 GLYATL2Q8WU03 294 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 ZFAND2BQ8WV99 257 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 HARBI1Q96MB7 349 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 JMJD8Q96S16 334 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 SLC25A33Q9BSK2 321 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 PLSCR3Q9NRY6 295 aa19.29■□□□□ 0.68
PVT1-212ENST00000521951 A0A0A6YYJ9 748 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 SRRM4A7MD48 611 aaKnown RBP19.28■□□□□ 0.68
PVT1-212ENST00000521951 CLDN34H7C241 214 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 TCF21O43680 179 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 OR2F2O95006 317 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 HPRT1P00492 218 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 OR4E1P0C645 316 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 UCP1P25874 307 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 MECP2P51608 486 aaKnown RBP19.28■□□□□ 0.68
PVT1-212ENST00000521951 MARVELD1Q9BSK0 173 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 TMEM222Q9H0R3 208 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 PLEKHA2Q9HB19 425 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 CUBNO60494 3623 aa19.28■□□□□ 0.68
PVT1-212ENST00000521951 CHST1O43916 411 aa19.27■□□□□ 0.68
PVT1-212ENST00000521951 S1PR2O95136 353 aa19.27■□□□□ 0.68
PVT1-212ENST00000521951 SERPINE2P07093 398 aa19.27■□□□□ 0.68
PVT1-212ENST00000521951 VAMP1P23763 118 aa19.27■□□□□ 0.68
PVT1-212ENST00000521951 LGALS7P47929 136 aa19.27■□□□□ 0.68
PVT1-212ENST00000521951 TMEM187Q14656 261 aa19.27■□□□□ 0.68
PVT1-212ENST00000521951 C11orf88Q6PI97 169 aa19.27■□□□□ 0.68
PVT1-212ENST00000521951 TSNAXQ99598 290 aaKnown RBP19.27■□□□□ 0.68
PVT1-212ENST00000521951 NCBP2LA6PVI3 153 aaKnown RBP19.26■□□□□ 0.67
PVT1-212ENST00000521951 INMT-MINDY4F8WBC2 141 aa19.26■□□□□ 0.67
PVT1-212ENST00000521951 SFT2D2O95562 160 aa19.26■□□□□ 0.67
PVT1-212ENST00000521951 IFNA2P01563 188 aa19.26■□□□□ 0.67
PVT1-212ENST00000521951 IGLV2-23P01705 113 aa19.26■□□□□ 0.67
PVT1-212ENST00000521951 MMDQ15546 238 aa19.26■□□□□ 0.67
PVT1-212ENST00000521951 LIAT1Q6ZQX7 453 aa19.26■□□□□ 0.67
PVT1-212ENST00000521951 NPBQ8NG41 125 aa19.26■□□□□ 0.67
PVT1-212ENST00000521951 NBR2O15453 112 aa19.25■□□□□ 0.67
PVT1-212ENST00000521951 IGKV1-39P01597 117 aa19.25■□□□□ 0.67
PVT1-212ENST00000521951 IGKV1D-39P04432 117 aa19.25■□□□□ 0.67
PVT1-212ENST00000521951 UBA52P62987 128 aaKnown RBP19.25■□□□□ 0.67
PVT1-212ENST00000521951 PSG5Q15238 335 aa19.25■□□□□ 0.67
PVT1-212ENST00000521951 C4orf46Q504U0 113 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms