RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SMARCD3Q6STE5 483 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 ASCL4Q6XD76 172 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 SSX6Q7RTT6 188 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 OR2W3Q7Z3T1 314 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 DEFB128Q7Z7B8 93 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 NIT1Q86X76 327 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 ST20-AS1Q8NBB2 130 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 LINC00301Q8NCQ3 95 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 FBXO36Q8NEA4 188 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 OR4P4Q8NGL7 312 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 OR10X1Q8NGY0 326 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 FAM131CQ96AQ9 280 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 PYURFQ96I23 114 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 LXNQ9BS40 222 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 MARVELD1Q9BSK0 173 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 PBDC1Q9BVG4 233 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 SEC11CQ9BY50 192 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 NAA50Q9GZZ1 169 aaKnown RBP2.65□□□□□ -1.99
SKP1-208ENST00000521216 ABCG5Q9H222 651 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 PXMP2Q9NR77 195 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.65□□□□□ -1.99
SKP1-208ENST00000521216 CLN6Q9NWW5 311 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 OPTCQ9UBM4 332 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 CLN8Q9UBY8 286 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 HHLA2Q9UM44 414 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 TFR2Q9UP52 801 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 RCL1Q9Y2P8 373 aaKnown RBP2.65□□□□□ -1.99
SKP1-208ENST00000521216 MYH8P13535 1937 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 ATRNO75882 1429 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 EDC4Q6P2E9 1401 aaKnown RBP2.65□□□□□ -1.99
SKP1-208ENST00000521216 KIF1BO60333 1816 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 TSPOAP1O95153 1857 aa2.65□□□□□ -1.99
SKP1-208ENST00000521216 COL22A1Q8NFW1 1626 aaPredicted RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 MADDQ8WXG6 1647 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 ZNF142P52746 1687 aaPredicted RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 OTOFQ9HC10 1997 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 IGSF23A1L1A6 192 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 ZNF99A8MXY4 864 aaPredicted RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 H0Y980 276 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 CORTO00230 105 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 RFXANKO14593 260 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 OR2T1O43869 369 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 PDE6DO43924 150 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 TYMSP04818 313 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 PGA4P0DJD7 388 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 PGA3P0DJD8 388 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 PGA5P0DJD9 388 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 RD3LP0DJH9 198 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 CMPK1P30085 196 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 ADORA1P30542 326 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 BRS3P32247 399 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 POLR2IP36954 125 aaKnown RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 COILP38432 576 aaPredicted RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 ARPP19P56211 112 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 PIGPP57054 158 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 OR2B8PP59922 312 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 CKS1BP61024 79 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 SNRPD2P62316 118 aaKnown RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 BTN3A2P78410 334 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 RHOGP84095 191 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 CDK6Q00534 326 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 BAXQ07812 192 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 RHEBQ15382 184 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 PDZD11Q5EBL8 140 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 TMEM69Q5SWH9 247 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 TMEM244Q5VVB8 128 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 DRAM2Q6UX65 266 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 TMPPEQ6ZT21 453 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 ZNF720Q7Z2F6 126 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 SLC30A8Q8IWU4 369 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 SYS1Q8N2H4 156 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 TMEM251Q8N6I4 163 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 SLC30A7Q8NEW0 376 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 RERGQ96A58 199 aaPredicted RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 YIPF6Q96EC8 236 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 MRAP2Q96G30 205 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 REEP6Q96HR9 211 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 JSRP1Q96MG2 331 aaPredicted RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 ZFP3Q96NJ6 502 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 OR2M4Q96R27 311 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 TP53RKQ96S44 253 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 SUCNR1Q9BXA5 334 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 MS4A8Q9BY19 250 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 CST9LQ9H4G1 147 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 JPT1Q9UK76 154 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 FARSAQ9Y285 508 aaKnown RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 KPTNQ9Y664 436 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 PTPRKQ15262 1439 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 ADGRB2O60241 1585 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 CRYBG1Q9Y4K1 1723 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 C1orf167Q5SNV9 1468 aa2.64□□□□□ -1.99
SKP1-208ENST00000521216 EIF2AK4Q9P2K8 1649 aaKnown RBP2.64□□□□□ -1.99
SKP1-208ENST00000521216 PIK3C2AO00443 1686 aa2.63□□□□□ -1.99
SKP1-208ENST00000521216 CUL7Q14999 1698 aa2.63□□□□□ -1.99
SKP1-208ENST00000521216 ASXL1Q8IXJ9 1541 aa2.63□□□□□ -1.99
SKP1-208ENST00000521216 TOPBP1Q92547 1522 aa2.63□□□□□ -1.99
SKP1-208ENST00000521216 CDC42BPGQ6DT37 1551 aa2.63□□□□□ -1.99
SKP1-208ENST00000521216 DISP2A7MBM2 1401 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms