RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 SPIN2BQ9BPZ2 258 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 PDCD10Q9BUL8 212 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 PLEKHA2Q9HB19 425 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 FAM96BQ9Y3D0 163 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 TMED3Q9Y3Q3 217 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.24□□□□□ -1.25
CSMD1-208ENST00000520561 IGHV3-72A0A0B4J1Y9 119 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 C5orf51A6NDU8 294 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 DBX1A6NMT0 343 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 FAM25EA8MYX2 175 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 SHOXO15266 292 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 ADAP1O75689 374 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 HRASP01112 189 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 AVPP01185 164 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 NQO2P16083 231 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 HNF1AP20823 631 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 VDAC1P21796 283 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 BRS3P32247 399 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 LINC00205P59089 165 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 KLF17Q5JT82 389 aaPredicted RBP7.23□□□□□ -1.25
CSMD1-208ENST00000520561 LDLRAD2Q5SZI1 272 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 GGNBP1Q5YKI7 109 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 FAM219AQ8IW50 185 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 PIP4P2Q8N4L2 257 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 DMBX1Q8NFW5 382 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 OR11H7Q8NGC8 314 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 OR4C13Q8NGP0 309 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 OSR1Q8TAX0 266 aaPredicted RBP7.23□□□□□ -1.25
CSMD1-208ENST00000520561 CHAC2Q8WUX2 184 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 ASB13Q8WXK3 278 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 FLYWCH2Q96CP2 140 aaKnown RBP7.23□□□□□ -1.25
CSMD1-208ENST00000520561 R3HDM4Q96D70 268 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 HARBI1Q96MB7 349 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 AIFM2Q9BRQ8 373 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 MS4A7Q9GZW8 240 aaPredicted RBP7.23□□□□□ -1.25
CSMD1-208ENST00000520561 NUP50Q9UKX7 468 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 CENPEQ02224 2701 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 CRYBG3Q68DQ2 2970 aa7.23□□□□□ -1.25
CSMD1-208ENST00000520561 CSMD2Q7Z408 3487 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 CCDC168Q8NDH2 2452 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 A0A0U1RQK1 487 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 C13orf42A0A1B0GVH6 325 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 MARCH11A6NNE9 402 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 PFDN1O60925 122 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 CCNKO75909 580 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 VENTXO95231 258 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 KRASP01116 189 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 FSHBP01225 129 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 IGKV1-39P01597 117 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 IGKV1-16P04430 117 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 IGKV1D-39P04432 117 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 FBP1P09467 338 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 GIPP09681 153 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-208ENST00000520561 CD1BP29016 333 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 G6PCP35575 357 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 BRWD1-AS2P59051 145 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 RPS16P62249 146 aaKnown RBP7.22□□□□□ -1.25
CSMD1-208ENST00000520561 CD83Q01151 205 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 IAH1Q2TAA2 248 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-208ENST00000520561 VMA21Q3ZAQ7 101 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 TMEM177Q53S58 311 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 H2BFWTQ7Z2G1 175 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 LYZL2Q7Z4W2 148 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 C17orf50Q8WW18 174 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 CFHR4Q92496 578 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 LSM10Q969L4 123 aaKnown RBP7.22□□□□□ -1.25
CSMD1-208ENST00000520561 TSNAXQ99598 290 aaKnown RBP7.22□□□□□ -1.25
CSMD1-208ENST00000520561 CHIAQ9BZP6 476 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 ZNF436Q9C0F3 470 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-208ENST00000520561 YAE1D1Q9NRH1 226 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 MMP24Q9Y5R2 645 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 CELSR2Q9HCU4 2923 aa7.22□□□□□ -1.25
CSMD1-208ENST00000520561 WNK2Q9Y3S1 2297 aa7.21□□□□□ -1.25
CSMD1-208ENST00000520561 SPDEFO95238 335 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 SIX6O95475 246 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 MOSP00540 346 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 IGKV1D-33P01593 117 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 IGKV1-33P01594 117 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 IGKV1-5P01602 117 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 SNRNP70P08621 437 aaKnown RBP7.21□□□□□ -1.26
CSMD1-208ENST00000520561 FAM106CPP0CH98 169 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 HLA-GP17693 338 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 CXCL3P19876 107 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 SRP14P37108 136 aaKnown RBP7.21□□□□□ -1.26
CSMD1-208ENST00000520561 LGALS7P47929 136 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 CYCSP99999 105 aaKnown RBP7.21□□□□□ -1.26
CSMD1-208ENST00000520561 KRTAP1-1Q07627 177 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 HES1Q14469 280 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 HABP2Q14520 560 aaPredicted RBP7.21□□□□□ -1.26
CSMD1-208ENST00000520561 SMCO1Q147U7 214 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 POU2AF1Q16633 256 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 C2orf68Q2NKX9 166 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 NMSQ5H8A3 153 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 SPNS3Q6ZMD2 512 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 SSX9Q7RTT3 188 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 DYNAPQ8N1N2 210 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 OR2T10Q8NGZ9 312 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 VSTM2AQ8TAG5 236 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 SEC22AQ96IW7 307 aa7.21□□□□□ -1.26
CSMD1-208ENST00000520561 C2orf50Q96LR7 162 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms