RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PITX3O75364 302 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 NDUFB4O95168 129 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 RCC1P18754 421 aaPredicted RBP9.44□□□□□ -0.9
TRIM41-209ENST00000515834 ATP6V0CP27449 155 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 COLCA1Q6ZS62 124 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 ST6GAL2Q96JF0 529 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 DLL3Q9NYJ7 618 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 DOCK5Q9H7D0 1870 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 RECKO95980 971 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 HSPB1P04792 205 aaKnown RBP9.44□□□□□ -0.9
TRIM41-209ENST00000515834 CTSBP07858 339 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 CLEC19AQ6UXS0 136 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 SLC16A13Q7RTY0 426 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 DNASE2BQ8WZ79 361 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 IGF2P01344 180 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 COX19Q49B96 90 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 CDS2O95674 445 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 MDKP21741 143 aaPredicted RBP9.44□□□□□ -0.9
TRIM41-209ENST00000515834 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 SIGIRRQ6IA17 410 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 NEU4Q8WWR8 484 aaPredicted RBP9.44□□□□□ -0.9
TRIM41-209ENST00000515834 ZNF107Q9UII5 783 aaPredicted RBP9.44□□□□□ -0.9
TRIM41-209ENST00000515834 CELA3AP09093 270 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 SELENOTP62341 195 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 PQLC2Q6ZP29 291 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 LSM10Q969L4 123 aaKnown RBP9.43□□□□□ -0.9
TRIM41-209ENST00000515834 TMEM186Q96B77 213 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 WNT5BQ9H1J7 359 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 H3BQ15 152 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 LMX1BO60663 402 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 EIF3GO75821 320 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRIM41-209ENST00000515834 CD1AP06126 327 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 MALP21145 153 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 CBY1Q9Y3M2 126 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 TRAV20A0A0B4J274 112 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 HIST1H4GQ99525 98 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 VGLL1Q99990 258 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 GP6Q9HCN6 339 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 MRPS16Q9Y3D3 137 aaKnown RBP9.43□□□□□ -0.9
TRIM41-209ENST00000515834 ZNFX1Q9P2E3 1918 aaKnown RBP9.43□□□□□ -0.9
TRIM41-209ENST00000515834 C7orf71A4D174 169 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 RNASE4P34096 147 aaKnown RBP9.43□□□□□ -0.9
TRIM41-209ENST00000515834 MMP16P51512 607 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 GTSCR1Q86UQ5 136 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 RFLNBQ8N5W9 214 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 FBXL15Q9H469 300 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 DNAJC4Q9NNZ3 241 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 SNRNP200O75643 2136 aaKnown RBP9.43□□□□□ -0.9
TRIM41-209ENST00000515834 TDRD15B5MCY1 1934 aaKnown RBP9.43□□□□□ -0.9
TRIM41-209ENST00000515834 COL22A1Q8NFW1 1626 aaPredicted RBP9.43□□□□□ -0.9
TRIM41-209ENST00000515834 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 A6NJY4 79 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 WDFY2Q96P53 400 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 KIR2DL4Q99706 377 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 GPR61Q9BZJ8 451 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 PEMTQ9UBM1 199 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 PPP1R27Q86WC6 154 aa9.43□□□□□ -0.9
TRIM41-209ENST00000515834 C17orf51A8MQB3 221 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
TRIM41-209ENST00000515834 C8orf46Q8TAG6 207 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 SCARF2Q96GP6 870 aaPredicted RBP9.42□□□□□ -0.9
TRIM41-209ENST00000515834 OR51M1Q9H341 326 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 FBXL7Q9UJT9 491 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 BCORQ6W2J9 1755 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 H0Y980 276 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 M0R381 172 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 ASAH2BP0C7U1 165 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 OTX1P32242 354 aaPredicted RBP9.42□□□□□ -0.9
TRIM41-209ENST00000515834 GPR183P32249 361 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 CDX1P47902 265 aaPredicted RBP9.42□□□□□ -0.9
TRIM41-209ENST00000515834 GOLT1AQ6ZVE7 132 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 IGKV3D-20A0A0C4DH25 116 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 GDF15Q99988 308 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 ZNF729A6NN14 1252 aaPredicted RBP9.42□□□□□ -0.9
TRIM41-209ENST00000515834 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
TRIM41-209ENST00000515834 TNFSF10P50591 281 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 CRYBA2P53672 197 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 ABLIM2Q6H8Q1 611 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 SLC25A47Q6Q0C1 308 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 FGFRL1Q8N441 504 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 F11RQ9Y624 299 aaKnown RBP9.42□□□□□ -0.9
TRIM41-209ENST00000515834 IGKV1-8A0A0C4DH67 115 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 CTDSPLO15194 276 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 FAM57AQ8TBR7 257 aa9.42□□□□□ -0.9
TRIM41-209ENST00000515834 ABCA3Q99758 1704 aa9.41□□□□□ -0.9
TRIM41-209ENST00000515834 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
TRIM41-209ENST00000515834 PGLYRP1O75594 196 aaPredicted RBP9.41□□□□□ -0.9
TRIM41-209ENST00000515834 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
TRIM41-209ENST00000515834 NANOS3P60323 173 aaKnown RBP9.41□□□□□ -0.9
TRIM41-209ENST00000515834 GLMPQ8WWB7 406 aa9.41□□□□□ -0.9
TRIM41-209ENST00000515834 FOXA2Q9Y261 457 aaPredicted RBP9.41□□□□□ -0.9
TRIM41-209ENST00000515834 MYO16Q9Y6X6 1858 aa9.41□□□□□ -0.9
TRIM41-209ENST00000515834 FOXB2Q5VYV0 432 aa9.41□□□□□ -0.9
TRIM41-209ENST00000515834 COPS9Q8WXC6 57 aa9.41□□□□□ -0.9
TRIM41-209ENST00000515834 NPIPB3Q92617 1050 aa9.41□□□□□ -0.9
TRIM41-209ENST00000515834 ALKBH7Q9BT30 221 aaPredicted RBP9.41□□□□□ -0.9
TRIM41-209ENST00000515834 ZG16O60844 167 aa9.41□□□□□ -0.9
TRIM41-209ENST00000515834 DNAL4O96015 105 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms