RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 SELENOHQ8IZQ5 122 aaKnown RBP11.24□□□□□ -0.61
TCOF1-213ENST00000514442 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 SEMA5BQ9P283 1151 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 IGKV1D-43A0A0B4J1Z2 117 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 SYNGR1O43759 233 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 NDUFB4O95168 129 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 ZNF658BQ4V348 819 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-213ENST00000514442 MRPL54Q6P161 138 aaKnown RBP11.24□□□□□ -0.61
TCOF1-213ENST00000514442 NPIPB7O75200 414 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 CA11O75493 328 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 NPSP0C0P6 89 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 NIT1Q86X76 327 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 BPIFA4PQ86YQ2 179 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 CEBPDP49716 269 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-213ENST00000514442 WDFY1Q8IWB7 410 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 OR1K1Q8NGR3 316 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 FAM122AQ96E09 287 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 SDK2Q58EX2 2172 aa11.24□□□□□ -0.61
TCOF1-213ENST00000514442 OR2W1Q9Y3N9 320 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 CIDEAO60543 219 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 CT45A10P0DMU9 189 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 G6PCP35575 357 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 CDPF1Q6NVV7 123 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 NEU1Q99519 415 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 TIMP4Q99727 224 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 PSMG3Q9BT73 122 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-213ENST00000514442 RPRMQ9NS64 109 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 TNFRSF19Q9NS68 423 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 OR1A1Q9P1Q5 309 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 RHBDL1O75783 438 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 PSG2P11465 335 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 PRRX1P54821 245 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 GABRA6Q16445 453 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 MAP1LC3CQ9BXW4 147 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 SRSF10O75494 262 aaKnown RBP11.23□□□□□ -0.61
TCOF1-213ENST00000514442 RHOBP62745 196 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 TNXAQ16473 311 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 CSRP2Q16527 193 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 OR4S2Q8NH73 311 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 WNT5BQ9H1J7 359 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 CEP250Q9BV73 2442 aa11.23□□□□□ -0.61
TCOF1-213ENST00000514442 A0A1B0GV72 72 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 AHRRA9YTQ3 701 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 UMODP07911 640 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 CEACAM1P13688 526 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 PLP1P60201 277 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 CFHR1Q03591 330 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 DPRXA6NFQ7 191 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 TAF15Q92804 592 aaKnown RBP eCLIP11.22□□□□□ -0.61
TCOF1-213ENST00000514442 OR2V2Q96R30 315 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 CDC42EP3Q9UKI2 254 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 TANC1Q9C0D5 1861 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 APELAP0DMC3 54 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 REG1BP48304 166 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 ACSM6Q6P461 480 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 OR8B3Q8NGG8 313 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 RCC1LQ96I51 464 aaKnown RBP11.22□□□□□ -0.61
TCOF1-213ENST00000514442 OR8B2Q96RD0 313 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 TIMM9Q9Y5J7 89 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 MYLKQ15746 1914 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 ARHGEF17Q96PE2 2063 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-213ENST00000514442 TRBV9A0A0B4J1U6 114 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 GZMHP20718 246 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 PRDX2P32119 198 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 PPOXP50336 477 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 VWA1Q6PCB0 445 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 LINC00114Q6XXX2 140 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 CCL13Q99616 98 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 SLC45A2Q9UMX9 530 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 IGHMP01871 453 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 KIR2DS2P43631 304 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 RPL23P62829 140 aaKnown RBP11.22□□□□□ -0.61
TCOF1-213ENST00000514442 ATOH7Q8N100 152 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 OR52L2PQ8NGH6 319 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 SFRP2Q96HF1 295 aa11.22□□□□□ -0.61
TCOF1-213ENST00000514442 IFITM10A6NMD0 228 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 H0Y980 276 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 MMDQ15546 238 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 KRTCAP3Q53RY4 240 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 MRPL14Q6P1L8 145 aaKnown RBP11.21□□□□□ -0.61
TCOF1-213ENST00000514442 MS4A5Q9H3V2 200 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 HSPB7Q9UBY9 170 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 BMPR1BO00238 502 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 CXorf1O96002 111 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 F2RP25116 425 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 UCNP55089 124 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 ITLN1Q8WWA0 313 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 NUDT11Q96G61 164 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 RTN4RQ9BZR6 473 aa11.21□□□□□ -0.61
TCOF1-213ENST00000514442 ZNF703Q9H7S9 590 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-213ENST00000514442 SCTP09683 121 aa11.21□□□□□ -0.62
TCOF1-213ENST00000514442 ZNF883P0CG24 379 aa11.21□□□□□ -0.62
TCOF1-213ENST00000514442 UCP3P55916 312 aa11.21□□□□□ -0.62
TCOF1-213ENST00000514442 SLC25A34Q6PIV7 304 aa11.21□□□□□ -0.62
TCOF1-213ENST00000514442 FA2HQ7L5A8 372 aa11.21□□□□□ -0.62
TCOF1-213ENST00000514442 DOCK4Q8N1I0 1966 aa11.21□□□□□ -0.62
TCOF1-213ENST00000514442 FGF12P61328 243 aa11.21□□□□□ -0.62
TCOF1-213ENST00000514442 NHLH1Q02575 133 aa11.21□□□□□ -0.62
TCOF1-213ENST00000514442 TXNDC17Q9BRA2 123 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms