RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CCL3L1P16619 93 aa12.27□□□□□ -0.45
VCAN-211ENST00000513984 GNLYP22749 145 aa12.27□□□□□ -0.45
VCAN-211ENST00000513984 COL8A2P25067 703 aa12.27□□□□□ -0.45
VCAN-211ENST00000513984 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.45
VCAN-211ENST00000513984 UQCC3Q6UW78 93 aa12.27□□□□□ -0.45
VCAN-211ENST00000513984 OR4S2Q8NH73 311 aa12.27□□□□□ -0.45
VCAN-211ENST00000513984 SH3BGRL3Q9H299 93 aa12.27□□□□□ -0.45
VCAN-211ENST00000513984 MMP26Q9NRE1 261 aa12.27□□□□□ -0.45
VCAN-211ENST00000513984 DFFBO76075 338 aa12.26□□□□□ -0.45
VCAN-211ENST00000513984 IGHV2-70P01814 119 aa12.26□□□□□ -0.45
VCAN-211ENST00000513984 RAB5CP51148 216 aa12.26□□□□□ -0.45
VCAN-211ENST00000513984 DLX6P56179 175 aa12.26□□□□□ -0.45
VCAN-211ENST00000513984 IL34Q6ZMJ4 242 aa12.26□□□□□ -0.45
VCAN-211ENST00000513984 FAM122AQ96E09 287 aa12.26□□□□□ -0.45
VCAN-211ENST00000513984 LYNX1G3V0Z9 82 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 OR9G9P0C7N8 305 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 LYNX1P0DP58 116 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 NQO2P16083 231 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 ATP6V0CP27449 155 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 ERVK-16P61578 105 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 TMEM155Q4W5P6 130 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 BTNL8Q6UX41 500 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 TMEM14EPQ6UXP3 125 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 Q6ZRG5 221 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 ZNF383Q8NA42 475 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 LYPD6BQ8NI32 183 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 RAB39BQ96DA2 213 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 TSNAXQ99598 290 aaKnown RBP12.25□□□□□ -0.45
VCAN-211ENST00000513984 RAB1BQ9H0U4 201 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 TRBV23-1A0A0A0MS06 115 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 METTL15P1P0C7V9 234 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 ERVFRD-1P60508 538 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 HAPLN4Q86UW8 402 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 C8orf31Q8N9H6 132 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 ZNF596Q8TC21 504 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 CIB3Q96Q77 187 aaPredicted RBP12.25□□□□□ -0.45
VCAN-211ENST00000513984 CACFD1Q9UGQ2 172 aa12.25□□□□□ -0.45
VCAN-211ENST00000513984 STRAPQ9Y3F4 350 aaKnown RBP12.25□□□□□ -0.45
VCAN-211ENST00000513984 HRNRQ86YZ3 2850 aaPredicted RBP12.24□□□□□ -0.45
VCAN-211ENST00000513984 F2RL1P55085 397 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 HBG1P69891 147 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 HBG2P69892 147 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 ARL16Q0P5N6 197 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 PJVKQ0ZLH3 352 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 SPANXN5Q5MJ07 72 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 ZNF833PQ6ZTB9 187 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 DTX2Q86UW9 622 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 DTD1Q8TEA8 209 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 GNPNAT1Q96EK6 184 aaPredicted RBP12.24□□□□□ -0.45
VCAN-211ENST00000513984 HRH4Q9H3N8 390 aa12.24□□□□□ -0.45
VCAN-211ENST00000513984 A0A087X0M5 115 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 A0A1B0GX30 115 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 TRIM77I1YAP6 450 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 SOD3P08294 240 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 PLA2G5P39877 138 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 POU2AF1Q16633 256 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 ZNF841Q6ZN19 808 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 LINC00311Q8N616 119 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 ZNF525Q8N782 197 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 QTRT1Q9BXR0 403 aaKnown RBP12.23□□□□□ -0.45
VCAN-211ENST00000513984 MALRD1Q5VYJ5 2156 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 UMAD1C9J7I0 102 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 RBMXL2O75526 392 aaKnown RBP12.23□□□□□ -0.45
VCAN-211ENST00000513984 CRYZL1O95825 349 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 CT45A6P0DMU7 189 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 CT45A5P0DMU8 189 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 CT45A7P0DMV0 189 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 RELBQ01201 579 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 TUSC1Q2TAM9 212 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 PDLIM3Q53GG5 364 aaPredicted RBP12.23□□□□□ -0.45
VCAN-211ENST00000513984 TMEM182Q6ZP80 229 aaPredicted RBP12.23□□□□□ -0.45
VCAN-211ENST00000513984 SSX9Q7RTT3 188 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 OR2G3Q8NGZ4 309 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 OR52E5Q8NH55 327 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 NEU4Q8WWR8 484 aaPredicted RBP12.23□□□□□ -0.45
VCAN-211ENST00000513984 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 OR4C12Q96R67 309 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 TMEM140Q9NV12 185 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 ZNRD1Q9P1U0 126 aa12.23□□□□□ -0.45
VCAN-211ENST00000513984 RALYQ9UKM9 306 aaKnown RBP12.23□□□□□ -0.45
VCAN-211ENST00000513984 GPR37O15354 613 aa12.22□□□□□ -0.45
VCAN-211ENST00000513984 LY86O95711 162 aa12.22□□□□□ -0.45
VCAN-211ENST00000513984 IFNA5P01569 189 aa12.22□□□□□ -0.45
VCAN-211ENST00000513984 OR2B8PP59922 312 aa12.22□□□□□ -0.45
VCAN-211ENST00000513984 DHRS7BQ6IAN0 325 aaPredicted RBP12.22□□□□□ -0.45
VCAN-211ENST00000513984 FAM71F2Q6NXP2 309 aa12.22□□□□□ -0.45
VCAN-211ENST00000513984 VKORC1L1Q8N0U8 176 aa12.22□□□□□ -0.45
VCAN-211ENST00000513984 BPIFCQ8NFQ6 507 aa12.22□□□□□ -0.45
VCAN-211ENST00000513984 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
VCAN-211ENST00000513984 PARD6GQ9BYG4 376 aaPredicted RBP12.22□□□□□ -0.45
VCAN-211ENST00000513984 A0A1W2PPR1 153 aa12.21□□□□□ -0.45
VCAN-211ENST00000513984 CEBPZOSA8MTT3 80 aa12.21□□□□□ -0.45
VCAN-211ENST00000513984 PPIHO43447 177 aaKnown RBP12.21□□□□□ -0.45
VCAN-211ENST00000513984 CAMLGP49069 296 aa12.21□□□□□ -0.45
VCAN-211ENST00000513984 SPCS3P61009 180 aa12.21□□□□□ -0.45
VCAN-211ENST00000513984 RUNX1Q01196 453 aa12.21□□□□□ -0.45
VCAN-211ENST00000513984 ZNF429Q86V71 674 aa12.21□□□□□ -0.45
VCAN-211ENST00000513984 C11orf42Q8N5U0 333 aa12.21□□□□□ -0.45
VCAN-211ENST00000513984 RHOVQ96L33 236 aa12.21□□□□□ -0.45
VCAN-211ENST00000513984 ACACBO00763 2458 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms