RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 FAM90A14PP0C7W9 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A24PP0C7X0 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 ASPHD2Q6ICH7 369 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 TEPPQ6URK8 271 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 ZNF818PQ6ZRF7 136 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 LINC00596Q86U02 117 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 LSM10Q969L4 123 aaKnown RBP9.65□□□□□ -0.86
TCOF1-211ENST00000513346 TIMP4Q99727 224 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 TBL2Q9Y4P3 447 aaKnown RBP9.65□□□□□ -0.86
TCOF1-211ENST00000513346 NCOR2Q9Y618 2525 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM208BQ5VWN6 2430 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 TNFSF13O75888 250 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 GZMBP10144 247 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 CSRP1P21291 193 aaKnown RBP9.65□□□□□ -0.86
TCOF1-211ENST00000513346 WNT5AP41221 380 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 TFPI2P48307 235 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 SUPT4H1P63272 117 aaKnown RBP9.65□□□□□ -0.86
TCOF1-211ENST00000513346 ARL16Q0P5N6 197 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 LRRC75BQ2VPJ9 315 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 CCL17Q92583 94 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 HES4Q9HCC6 221 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 PXMP4Q9Y6I8 212 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 CEP350Q5VT06 3117 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 TRAV39A0A0B4J263 110 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 EGR1P18146 543 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 NPIPB13A6NJU9 1138 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 NPIPB4C9JG80 1138 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 AMY1AP04745 511 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 LYL1P12980 280 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 RPL11P62913 178 aaKnown RBP9.65□□□□□ -0.87
TCOF1-211ENST00000513346 TNFAIP6P98066 277 aaPredicted RBP9.65□□□□□ -0.87
TCOF1-211ENST00000513346 RELQ04864 619 aaPredicted RBP9.65□□□□□ -0.87
TCOF1-211ENST00000513346 IBA57Q5T440 356 aaKnown RBP9.65□□□□□ -0.87
TCOF1-211ENST00000513346 RIPPLY2Q5TAB7 128 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 FAM27BQ5VT28 67 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 TMEM105Q8N8V8 129 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 OR5A2Q8NGI9 324 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 OR1L4Q8NGR5 311 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 RND1Q92730 232 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.87
TCOF1-211ENST00000513346 WNT10AQ9GZT5 417 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 TMEM74BQ9NUR3 256 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 HS3ST3B1Q9Y662 390 aa9.65□□□□□ -0.87
TCOF1-211ENST00000513346 IGHV3-43A0A0B4J1X8 118 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 TRAV38-1A0A0B4J264 116 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 CA2P00918 260 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 OR4A8P0C604 315 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 IGHV3-43DP0DP04 118 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 KIR2DS2P43631 304 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 FGF12P61328 243 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 FAM166AQ6J272 317 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 SSX8Q7RTT4 187 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 OR2T6Q8NHC8 308 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 MRGPRDQ8TDS7 321 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 OR2H1Q9GZK4 316 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 GNB4Q9HAV0 340 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 PEF1Q9UBV8 284 aaKnown RBP9.64□□□□□ -0.87
TCOF1-211ENST00000513346 CDC42EP3Q9UKI2 254 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 EREGO14944 169 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 DNPH1O43598 174 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 FGFRL1Q8N441 504 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 GBGT1Q8N5D6 347 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 C18orf12Q96KH6 178 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 NPVFQ9HCQ7 196 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 SIP14410 1827 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 A0A1W2PR77 199 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 CORTO00230 105 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 LDLRAD4O15165 306 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 LEPROTL1O95214 131 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 P01737 135 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 SPINK2P20155 84 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 IZUMO4Q1ZYL8 232 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 RSPO4Q2I0M5 234 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-211ENST00000513346 LHFPL1Q86WI0 220 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 LRRC29Q8WV35 223 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 IMMP2LQ96T52 175 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 WDR81Q562E7 1941 aa9.64□□□□□ -0.87
TCOF1-211ENST00000513346 SERF1AO75920 110 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 S1PR2O95136 353 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 CELA2AP08217 269 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 FABP2P12104 132 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 UCP1P25874 307 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 UQCRFS1P47985 274 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 MRPL52Q86TS9 123 aaKnown RBP9.63□□□□□ -0.87
TCOF1-211ENST00000513346 ZFP30Q9Y2G7 519 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 DIDO1Q9BTC0 2240 aaKnown RBP9.63□□□□□ -0.87
TCOF1-211ENST00000513346 FBLL1A6NHQ2 334 aaKnown RBP9.63□□□□□ -0.87
TCOF1-211ENST00000513346 HBZP02008 142 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 TDGF1P3P51864 188 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 TMEM38BQ9NVV0 291 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 TCF20Q9UGU0 1960 aaKnown RBP9.63□□□□□ -0.87
TCOF1-211ENST00000513346 A0A1W2PQM1 296 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 OOEPA6NGQ2 149 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 PPIHO43447 177 aaKnown RBP9.63□□□□□ -0.87
TCOF1-211ENST00000513346 CD3EP07766 207 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 BTF3P20290 206 aaKnown RBP9.63□□□□□ -0.87
TCOF1-211ENST00000513346 IL36BQ9NZH7 164 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 C3orf80F5H4A9 247 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 CLEC3BP05452 202 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 FBLN7Q53RD9 439 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms