RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 TIMD4Q96H15 378 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 PILRBQ9UKJ0 227 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 DOCK9Q9BZ29 2069 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 WNT5AP41221 380 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 TSPO2Q5TGU0 170 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 OR8G5Q8NG78 346 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 SPSB1Q96BD6 273 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 SEBOXQ9HB31 216 aaPredicted RBP9.38□□□□□ -0.91
CPNE4-209ENST00000512055 TMEM160Q9NX00 188 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 IL36GQ9NZH8 169 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 SELENOKQ9Y6D0 94 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 IGLV1-36A0A0B4J1U3 117 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 A8MWL6 223 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 BCL2P10415 239 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 JMJD6Q6NYC1 403 aaPredicted RBP9.38□□□□□ -0.91
CPNE4-209ENST00000512055 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.38□□□□□ -0.91
CPNE4-209ENST00000512055 RFESDQ8TAC1 157 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 HIST1H2BAQ96A08 127 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 VOPP1Q96AW1 172 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 GRAMD2BQ96HH9 432 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 WDR13Q9H1Z4 485 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 A0A0J9YW62 118 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
CPNE4-209ENST00000512055 PPP1CCP36873 323 aaKnown RBP9.38□□□□□ -0.91
CPNE4-209ENST00000512055 HOXA4Q00056 320 aaPredicted RBP9.38□□□□□ -0.91
CPNE4-209ENST00000512055 ZNF766Q5HY98 468 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 ZDHHC16Q969W1 377 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 PRELID3AQ96N28 172 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 NDUFAF3Q9BU61 184 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 TRAV8-1A0A0A6YYK1 113 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 H0YL77 283 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 MAGEA5P43359 124 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 RNFT1Q5M7Z0 435 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 PRNTQ86SH4 94 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 Q8WTZ3 238 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 SLC25A38Q96DW6 304 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 MESP1Q9BRJ9 268 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 ZNF665Q9H7R5 613 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 A0A1W2PRD5 423 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 A0A1W2PRF3 423 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 A0A1W2PRM7 423 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 NDUFB4O95168 129 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 VSIG8P0DPA2 414 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 HIST1H4AP62805 103 aaKnown RBP9.37□□□□□ -0.91
CPNE4-209ENST00000512055 HBBP68871 147 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 OR1L8Q8NGR8 309 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 APOBEC3DQ96AK3 386 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-209ENST00000512055 CTXND1A0A1B0GTU2 59 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 ZNHIT1O43257 154 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 ZNF205O95201 554 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 ACP1P24666 158 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 EWSR1Q01844 656 aaKnown RBP eCLIP9.37□□□□□ -0.91
CPNE4-209ENST00000512055 IBA57Q5T440 356 aaKnown RBP9.37□□□□□ -0.91
CPNE4-209ENST00000512055 OR4D5Q8NGN0 318 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 SPSB2Q99619 263 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 ZNF257Q9Y2Q1 563 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 LOC105371267A0A1B0GV96 52 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 LSM6P62312 80 aaKnown RBP9.37□□□□□ -0.91
CPNE4-209ENST00000512055 TRIP6Q15654 476 aaKnown RBP9.37□□□□□ -0.91
CPNE4-209ENST00000512055 LYG1Q8N1E2 194 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 HS3ST3B1Q9Y662 390 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 MDC1Q14676 2089 aaKnown RBP9.37□□□□□ -0.91
CPNE4-209ENST00000512055 APCDD1LQ8NCL9 501 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 SARAFQ96BY9 339 aa9.37□□□□□ -0.91
CPNE4-209ENST00000512055 A0A1W2PPC1 479 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 CXorf1O96002 111 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 OR1K1Q8NGR3 316 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 AQP10Q96PS8 301 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 KCNK17Q96T54 332 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 IGKV3D-11A0A0A0MRZ8 115 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 LOC390937A0A1W2PQ73 354 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 ZP4Q12836 540 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 CXorf67Q86X51 503 aaPredicted RBP9.36□□□□□ -0.91
CPNE4-209ENST00000512055 FRMPD3Q5JV73 1810 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 IGHV1-45A0A0A0MS14 117 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 TRBV5-5A0A0J9YX44 114 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 PRTN3P24158 256 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 LRRC75BQ2VPJ9 315 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 ZNF362Q5T0B9 420 aaPredicted RBP9.36□□□□□ -0.91
CPNE4-209ENST00000512055 SELENOHQ8IZQ5 122 aaKnown RBP9.36□□□□□ -0.91
CPNE4-209ENST00000512055 NHP2Q9NX24 153 aaKnown RBP9.36□□□□□ -0.91
CPNE4-209ENST00000512055 TRGV10A0A0A0MS01 117 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 LINC01387J3KSC0 135 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 TGIF1Q15583 401 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 CPEB3Q8NE35 698 aaKnown RBP9.36□□□□□ -0.91
CPNE4-209ENST00000512055 OR52E5Q8NH55 327 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 RTN4RQ9BZR6 473 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 ICE1Q9Y2F5 2266 aa9.36□□□□□ -0.91
CPNE4-209ENST00000512055 A0A1W2PRS3 328 aa9.35□□□□□ -0.91
CPNE4-209ENST00000512055 TMEM30CPA0ZSE6 113 aa9.35□□□□□ -0.91
CPNE4-209ENST00000512055 CD1AP06126 327 aa9.35□□□□□ -0.91
CPNE4-209ENST00000512055 RGS7BPQ6MZT1 257 aaPredicted RBP9.35□□□□□ -0.91
CPNE4-209ENST00000512055 SLC25A40Q8TBP6 338 aa9.35□□□□□ -0.91
CPNE4-209ENST00000512055 RAB1CQ92928 201 aa9.35□□□□□ -0.91
CPNE4-209ENST00000512055 TUBD1Q9UJT1 453 aa9.35□□□□□ -0.91
CPNE4-209ENST00000512055 ZNF318Q5VUA4 2279 aa9.35□□□□□ -0.91
CPNE4-209ENST00000512055 MPDU1O75352 247 aa9.35□□□□□ -0.91
CPNE4-209ENST00000512055 HIST1H1AQ02539 215 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms