RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 FAM166AQ6J272 317 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 LRP10Q7Z4F1 713 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 DTX2Q86UW9 622 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 TMEM252Q8N6L7 170 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 GLIS1Q8NBF1 620 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 NEIL2Q969S2 332 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 C16orf92Q96LL3 132 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 SIGLEC12Q96PQ1 595 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 HRASLS2Q9NWW9 162 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 NHP2Q9NX24 153 aaKnown RBP3.09□□□□□ -1.91
USP53-205ENST00000509769 SLAMF8Q9P0V8 285 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 TIMM13Q9Y5L4 95 aaPredicted RBP3.09□□□□□ -1.91
USP53-205ENST00000509769 HCFC2Q9Y5Z7 792 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 FAM181BA6NEQ2 426 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 ZNF195O14628 629 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 CD5P06127 495 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 AZU1P20160 251 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 SYNJ2BPP57105 145 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 RTP5Q14D33 572 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 ACTL10Q5JWF8 245 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 ZNF362Q5T0B9 420 aaPredicted RBP3.09□□□□□ -1.91
USP53-205ENST00000509769 FAM72AQ5TYM5 149 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 GLCCI1Q86VQ1 547 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 RPRMLQ8N4K4 120 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 TMEM86BQ8N661 226 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 CT55Q8WUE5 264 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 DIRC2Q96SL1 478 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 WDR83Q9BRX9 315 aaKnown RBP3.09□□□□□ -1.91
USP53-205ENST00000509769 RNF115Q9Y4L5 304 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 PXMP4Q9Y6I8 212 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 TRAV21A0A0B4J279 112 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 DDTLA6NHG4 134 aaPredicted RBP3.09□□□□□ -1.91
USP53-205ENST00000509769 FAM90A9PA6NNJ1 464 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 NKX2-2O95096 273 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 NDUFB4O95168 129 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 TOMM40O96008 361 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 CST3P01034 146 aaPredicted RBP3.09□□□□□ -1.91
USP53-205ENST00000509769 IQCF3P0C7M6 154 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 ZNF865P0CJ78 1059 aaPredicted RBP3.09□□□□□ -1.91
USP53-205ENST00000509769 PSG1P11464 419 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 B4GALT1P15291 398 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 KLK2P20151 261 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 RND2P52198 227 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 NR0B2Q15466 257 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 LYPD8Q6UX82 237 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 MAVSQ7Z434 540 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 MDP1Q86V88 176 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 DTX1Q86Y01 620 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 SAXO1Q8IYX7 474 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 SIRT6Q8N6T7 355 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 FAM57AQ8TBR7 257 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 MVB12AQ96EY5 273 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 DUSP15Q9H1R2 295 aaPredicted RBP3.09□□□□□ -1.91
USP53-205ENST00000509769 IL25Q9H293 177 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 B9D1Q9UPM9 204 aa3.09□□□□□ -1.91
USP53-205ENST00000509769 LTBP2Q14767 1821 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 ECM29Q5VYK3 1845 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 FAM231BA6NCW3 169 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 AHRRA9YTQ3 701 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 SHISA9B4DS77 424 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 F2Z2F3 143 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 WNT9BO14905 357 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 C1QAP02745 245 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 AMBPP02760 352 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 IGHV4-34P06331 123 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 WNT5AP41221 380 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 LSM6P62312 80 aaKnown RBP3.09□□□□□ -1.92
USP53-205ENST00000509769 RPL8P62917 257 aaKnown RBP3.09□□□□□ -1.92
USP53-205ENST00000509769 IFITM3Q01628 133 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 DUSP28Q4G0W2 176 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 DEFB134Q4QY38 66 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 TMEM78Q5T7P6 136 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 UNQ5815/PRO19632Q6UWF5 114 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 TMEM91Q6ZNR0 172 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 BCL6BQ8N143 479 aaPredicted RBP3.09□□□□□ -1.92
USP53-205ENST00000509769 MORN4Q8NDC4 146 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 TM4SF18Q96CE8 201 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 TMEM222Q9H0R3 208 aa3.09□□□□□ -1.92
USP53-205ENST00000509769 IGLV3-22A0A075B6J6 115 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 TRBV7-9A0A0J9YWB2 115 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 PPIAL4DF5H284 164 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 J3KTA2 159 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 PRRG2O14669 202 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 C1orf105O95561 183 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 PRSS2P07478 247 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 SELLP14151 372 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 TNFRSF1AP19438 455 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 ANOS1P23352 680 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 CCL20P78556 96 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 RBM3P98179 157 aaKnown RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 ZNF841Q6ZN19 808 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 LINC00696Q6ZRV3 163 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 FAM89BQ8N5H3 189 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 OR4C3Q8NH37 302 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 TMEM40Q8WWA1 233 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 KLK6Q92876 244 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 RPP21Q9H633 154 aaKnown RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 MED29Q9NX70 200 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 IL36GQ9NZH8 169 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 TCHHQ07283 1943 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms