RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 PDGFRLQ15198 375 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 RHEBQ15382 184 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 MMDQ15546 238 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 SAMD13Q5VXD3 122 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 DAZ4Q86SG3 579 aaKnown RBP3.02□□□□□ -1.93
LINC01088-203ENST00000507476 LRP11Q86VZ4 500 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 AMN1Q8IY45 258 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 SLC22A24Q8N4F4 322 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 EIF4E3Q8N5X7 224 aaKnown RBP3.02□□□□□ -1.93
LINC01088-203ENST00000507476 OR8B12Q8NGG6 310 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 OR13D1Q8NGV5 346 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 OR52N1Q8NH53 320 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 RAB2BQ8WUD1 216 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 MBD3L1Q8WWY6 194 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 RBPMSQ93062 196 aaKnown RBP3.02□□□□□ -1.93
LINC01088-203ENST00000507476 CMBLQ96DG6 245 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 GNPNAT1Q96EK6 184 aaPredicted RBP3.02□□□□□ -1.93
LINC01088-203ENST00000507476 L3HYPDHQ96EM0 354 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 PEBP4Q96S96 227 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 TSC22D3Q99576 134 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 C1orf50Q9BV19 199 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 MS4A8Q9BY19 250 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 DAZ1Q9NQZ3 744 aaKnown RBP3.02□□□□□ -1.93
LINC01088-203ENST00000507476 ZNF355PQ9NSJ1 428 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 TMEM38BQ9NVV0 291 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 RPS6KB2Q9UBS0 482 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 GINS2Q9Y248 185 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 ATRNO75882 1429 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 DCCP43146 1447 aa3.02□□□□□ -1.93
LINC01088-203ENST00000507476 WRNQ14191 1432 aaPredicted RBP eCLIP3.02□□□□□ -1.93
LINC01088-203ENST00000507476 DHX57Q6P158 1386 aaKnown RBP3.01□□□□□ -1.93
LINC01088-203ENST00000507476 TRAPPC13A5PLN9 417 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 UBE2L6O14933 153 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 OR7C2O60412 319 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 IGHMP01871 453 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 PFN1P07737 140 aaKnown RBP3.01□□□□□ -1.93
LINC01088-203ENST00000507476 ADRA2AP08913 450 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 RBP1P09455 135 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 PTHLHP12272 177 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 CCL1P22362 96 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 PPIBP23284 216 aaKnown RBP3.01□□□□□ -1.93
LINC01088-203ENST00000507476 CNTFRP26992 372 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 NCALDP61601 193 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 GNB2P62879 340 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 GNG5P63218 68 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 RUNX1Q01196 453 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 FLI1Q01543 452 aaPredicted RBP3.01□□□□□ -1.93
LINC01088-203ENST00000507476 CCDC58Q4VC31 144 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 SCXQ7RTU7 201 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 FRZBQ92765 325 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 ZNF799Q96GE5 643 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 CCL13Q99616 98 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 GABARAPL1Q9H0R8 117 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 ACER3Q9NUN7 267 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 ZNF492Q9P255 531 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 PRNDQ9UKY0 176 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 TMEM56-RWDD3S4R434 201 aa3.01□□□□□ -1.93
LINC01088-203ENST00000507476 GPATCH8Q9UKJ3 1502 aaKnown RBP3.01□□□□□ -1.93
LINC01088-203ENST00000507476 YTHDC2Q9H6S0 1430 aaKnown RBP3.01□□□□□ -1.93
LINC01088-203ENST00000507476 MIA3Q5JRA6 1907 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 IGHV3-21A0A0B4J1V1 117 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 IZUMO1RA6ND01 250 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 SLC17A3O00476 420 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 ORC5O43913 435 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 IGLV3-27P01718 113 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 PPBPP02775 128 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 CD7P09564 240 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 OR10J4P0C629 311 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 CPMP14384 443 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 SPI1P17947 270 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 CRABP1P29762 137 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 SCGB2B2Q4G0G5 96 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 TMEM128Q5BJH2 165 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 ZNF678Q5SXM1 525 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 DHFR2Q86XF0 187 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 C1orf174Q8IYL3 243 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 KRTCAP2Q8N6L1 136 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 ZNF615Q8N8J6 731 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 ITLN2Q8WWU7 325 aaPredicted RBP3□□□□□ -1.93
LINC01088-203ENST00000507476 KLK6Q92876 244 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 ELSPBP1Q96BH3 223 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 GPR146Q96CH1 333 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 MALSU1Q96EH3 234 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 TCEAL4Q96EI5 215 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 SHANK2-AS3Q9BTD1 123 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 CCDC32Q9BV29 185 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 ALX4Q9H161 411 aaPredicted RBP3□□□□□ -1.93
LINC01088-203ENST00000507476 SH3BGRL3Q9H299 93 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 TMEM138Q9NPI0 162 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 LHX9Q9NQ69 397 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 SPANXCQ9NY87 97 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 MED11Q9P086 117 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 TRAPPC1Q9Y5R8 145 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 TONSLQ96HA7 1378 aa3□□□□□ -1.93
LINC01088-203ENST00000507476 ARAP3Q8WWN8 1544 aa2.99□□□□□ -1.93
LINC01088-203ENST00000507476 TRBV20OR9-2A0A075B6H5 130 aa2.99□□□□□ -1.93
LINC01088-203ENST00000507476 TRAV9-1A0A075B6T8 112 aa2.99□□□□□ -1.93
LINC01088-203ENST00000507476 EFCAB10A6NFE3 127 aa2.99□□□□□ -1.93
LINC01088-203ENST00000507476 ARL5CA6NH57 179 aa2.99□□□□□ -1.93
LINC01088-203ENST00000507476 M0QZK8 103 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms