RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 ZNF727A8MUV8 499 aa16.17■□□□□ 0.18
SDHA-206ENST00000505555 IGKV1D-33P01593 117 aa16.17■□□□□ 0.18
SDHA-206ENST00000505555 IGKV1-33P01594 117 aa16.17■□□□□ 0.18
SDHA-206ENST00000505555 IGHV1-46P01743 117 aa16.17■□□□□ 0.18
SDHA-206ENST00000505555 CD40P25942 277 aa16.17■□□□□ 0.18
SDHA-206ENST00000505555 TMEM41BQ5BJD5 291 aa16.17■□□□□ 0.18
SDHA-206ENST00000505555 C1orf229Q6ZS94 237 aaPredicted RBP16.17■□□□□ 0.18
SDHA-206ENST00000505555 SH3BGRL2Q9UJC5 107 aa16.17■□□□□ 0.18
SDHA-206ENST00000505555 ADGRG4Q8IZF6 3080 aa16.16■□□□□ 0.18
SDHA-206ENST00000505555 NBL1P41271 181 aa16.16■□□□□ 0.18
SDHA-206ENST00000505555 TNFAIP6P98066 277 aaPredicted RBP16.16■□□□□ 0.18
SDHA-206ENST00000505555 CR1LQ2VPA4 569 aa16.16■□□□□ 0.18
SDHA-206ENST00000505555 C3orf36Q3SXR2 165 aa16.16■□□□□ 0.18
SDHA-206ENST00000505555 KHDC3LQ587J8 217 aa16.16■□□□□ 0.18
SDHA-206ENST00000505555 MBD3L1Q8WWY6 194 aa16.16■□□□□ 0.18
SDHA-206ENST00000505555 UNKLQ9H9P5 680 aaKnown RBP16.16■□□□□ 0.18
SDHA-206ENST00000505555 CALYQ9NYX4 217 aa16.16■□□□□ 0.18
SDHA-206ENST00000505555 YPEL1O60688 119 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 CCKARP32238 428 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 RPS23P62266 143 aaKnown RBP16.15■□□□□ 0.18
SDHA-206ENST00000505555 DOLPP1Q86YN1 238 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 CISD2Q8N5K1 135 aaKnown RBP16.15■□□□□ 0.18
SDHA-206ENST00000505555 Q8TCH9 128 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 YPEL2Q96QA6 119 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 LAMP3Q9UQV4 416 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 A0A0G2JNJ9 132 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 MKRN2OSH3BPM6 223 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 HMGB3O15347 200 aaKnown RBP16.15■□□□□ 0.18
SDHA-206ENST00000505555 RPP25LQ8N5L8 163 aaKnown RBP16.15■□□□□ 0.18
SDHA-206ENST00000505555 OR10P1Q8NGE3 313 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 PARD6GQ9BYG4 376 aaPredicted RBP16.15■□□□□ 0.18
SDHA-206ENST00000505555 IFI27L2Q9H2X8 130 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 DCAF16Q9NXF7 216 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 RNF7Q9UBF6 113 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 Q9UFV3 132 aa16.15■□□□□ 0.18
SDHA-206ENST00000505555 F2RL2O00254 374 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 OR2C1O95371 312 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 IGHV2-5P01817 119 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 TAGLN2P37802 199 aaKnown RBP16.14■□□□□ 0.17
SDHA-206ENST00000505555 SELENOVP59797 346 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 RAB11AP62491 216 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 DLK1P80370 383 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 TFF3Q07654 80 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 C17orf58Q2M2W7 97 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 ACSM6Q6P461 480 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 TP53TG5Q9Y2B4 290 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 IFNA17P01571 189 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 FGF7P21781 194 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 TMEM147Q9BVK8 224 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 METTL1Q9UBP6 276 aaKnown RBP16.14■□□□□ 0.17
SDHA-206ENST00000505555 PLCE1Q9P212 2302 aa16.14■□□□□ 0.17
SDHA-206ENST00000505555 DSCAMO60469 2012 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 MAP1LC3B2A6NCE7 125 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 CGB3P0DN86 165 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 CGB7P0DN87 165 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 BCL2P10415 239 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 GATA4P43694 442 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 CCL13Q99616 98 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 MAP1LC3BQ9GZQ8 125 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 SEBOXQ9HB31 216 aaPredicted RBP16.13■□□□□ 0.17
SDHA-206ENST00000505555 OR6C3Q9NZP0 311 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 HPRT1P00492 218 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 GYPAP02724 150 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 S100A6P06703 90 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 S100A12P80511 92 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 TLE1Q04724 770 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 ADAM5Q6NVV9 412 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 ZCCHC24Q8N2G6 241 aaKnown RBP16.13■□□□□ 0.17
SDHA-206ENST00000505555 PINX1Q96BK5 328 aaKnown RBP16.13■□□□□ 0.17
SDHA-206ENST00000505555 CIB3Q96Q77 187 aaPredicted RBP16.13■□□□□ 0.17
SDHA-206ENST00000505555 SLC39A9Q9NUM3 307 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 CISD1Q9NZ45 108 aaKnown RBP16.13■□□□□ 0.17
SDHA-206ENST00000505555 IL19Q9UHD0 177 aa16.13■□□□□ 0.17
SDHA-206ENST00000505555 PTPRZ1P23471 2315 aaPredicted RBP16.12■□□□□ 0.17
SDHA-206ENST00000505555 TRAV3A0A0B4J244 114 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 S100A8P05109 93 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 ATP6V1FQ16864 119 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 CT45A1Q5HYN5 189 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 PRAMEF5Q5TYX0 476 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 HEPN1Q6WQI6 88 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 RBMS3Q6XE24 437 aaKnown RBP16.12■□□□□ 0.17
SDHA-206ENST00000505555 C1QL4Q86Z23 238 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 WFDC8Q8IUA0 241 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 CT45A3Q8NHU0 189 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 FAM222BQ8WU58 562 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 SNRNP40Q96DI7 357 aaKnown RBP16.12■□□□□ 0.17
SDHA-206ENST00000505555 NIPSNAP3BQ9BS92 247 aa16.12■□□□□ 0.17
SDHA-206ENST00000505555 CCL8P80075 99 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 STUMQ69YW2 141 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 FAM216BQ8N7L0 139 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 TVP23CQ96ET8 276 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 TMPRSS5Q9H3S3 457 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 SLC25A22Q9H936 323 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 C15orf62A8K5M9 175 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 PRRG2O14669 202 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 FAM90A2PQ658T7 463 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 CENPVQ7Z7K6 275 aaPredicted RBP16.11■□□□□ 0.17
SDHA-206ENST00000505555 OR4A16Q8NH70 328 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 LHX4Q969G2 390 aa16.11■□□□□ 0.17
SDHA-206ENST00000505555 GAFA1Q96PS6 74 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms