RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 ABCA11PQ4W5N1 156 aa14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 TMED4Q7Z7H5 227 aa14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 CENPVQ7Z7K6 275 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 OR5AU1Q8NGC0 362 aa14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 RBM14Q96PK6 669 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 RSRP1Q9BUV0 290 aa14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 IGHV3-43A0A0B4J1X8 118 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 A0A0B4J293 547 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 IGKV1D-13A0A0B4J2D9 117 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 J3QR06 171 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 FAM106CPP0CH98 169 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 IGHV3-43DP0DP04 118 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 IGKV1-13P0DP09 117 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 RAB7AP51149 207 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 RAB25P57735 213 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 MORN2Q502X0 79 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 SLC25A42Q86VD7 318 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 OR2AK2Q8NG84 335 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 WIPF2Q8TF74 440 aaPredicted RBP14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 SECTM1Q8WVN6 248 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 LEAP2Q969E1 77 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 SLC5A7Q9GZV3 580 aa14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 PARP12Q9H0J9 701 aaKnown RBP14.35□□□□□ -0.11
SQSTM1-209ENST00000504627 LY6LH3BQJ8 138 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 GPR31O00270 319 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 SLC22A5O76082 557 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 GNG10P50151 68 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 RND3P61587 244 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 C9orf152Q5JTZ5 239 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 UTF1Q5T230 341 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 GLDNQ6ZMI3 551 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 CCDC71LQ8N9Z2 235 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 RTBDNQ9BSG5 229 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 ABHD14AQ9BUJ0 271 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 GPN1Q9HCN4 374 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 SLC2A9Q9NRM0 540 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 PSG11Q9UQ72 335 aa14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 RBM7Q9Y580 266 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-209ENST00000504627 PRKDCP78527 4128 aaKnown RBP14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 A0A1B0GVG6 124 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 A0A1W2PRX2 142 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 M0QZK8 103 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 S100GP29377 79 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 TMEM128Q5BJH2 165 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 SAMD5Q5TGI4 173 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 CMTM1Q8IZ96 169 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 ZNF645Q8N7E2 425 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 C8orf31Q8N9H6 132 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 ZNF439Q8NDP4 499 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 OR10X1Q8NGY0 326 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 OR2D2Q9H210 308 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 ALG5Q9Y673 324 aa14.33□□□□□ -0.12
SQSTM1-209ENST00000504627 SH2D7A6NKC9 451 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 SNRPGP15A8MWD9 76 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 OR4E1P0C645 316 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 OR8U9P0C7N5 309 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 PI3P19957 117 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 GNRHRP30968 328 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 PIGPP57054 158 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 DHODHQ02127 395 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 HES1Q14469 280 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 BEAN1Q3B7T3 259 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 C4orf46Q504U0 113 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 FBLN7Q53RD9 439 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 ZBTB34Q8NCN2 500 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 BVESQ8NE79 360 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 OR8U1Q8NH10 309 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 TMEM230Q96A57 120 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 IFI27L2Q9H2X8 130 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 ZNF221Q9UK13 617 aa14.32□□□□□ -0.12
SQSTM1-209ENST00000504627 hCG_2014768A0A024R1R8 64 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 TCRBV4S1A1TA0A5B7 111 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 CRYM-AS1A6NIL9 109 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 ST8SIA5O15466 376 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 PLXNB1O43157 2135 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 CREBL2O60519 120 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 SNRNP70P08621 437 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 PF4V1P10720 104 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 CD83Q01151 205 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 PPP1R1AQ13522 171 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 FAM53AQ6NSI3 398 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 ZNF818PQ6ZRF7 136 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 SLC25A48Q6ZT89 311 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 LYG2Q86SG7 212 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 THNSL2Q86YJ6 484 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 ADAD2Q8NCV1 583 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 OR4X2Q8NGF9 303 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 AGMATQ9BSE5 352 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 GHITMQ9H3K2 345 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 CCL28Q9NRJ3 127 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 MOB4Q9Y3A3 225 aa14.31□□□□□ -0.12
SQSTM1-209ENST00000504627 NOTCH3Q9UM47 2321 aa14.3□□□□□ -0.12
SQSTM1-209ENST00000504627 A0A1W2PPE3 182 aa14.3□□□□□ -0.12
SQSTM1-209ENST00000504627 ADARB2-AS1A8MUL3 147 aa14.3□□□□□ -0.12
SQSTM1-209ENST00000504627 HSD17B6O14756 317 aa14.3□□□□□ -0.12
SQSTM1-209ENST00000504627 HLA-AP01891 365 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-209ENST00000504627 AKR1C4P17516 323 aa14.3□□□□□ -0.12
SQSTM1-209ENST00000504627 DHRS2Q13268 280 aa14.3□□□□□ -0.12
SQSTM1-209ENST00000504627 PHLDA2Q53GA4 152 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms