RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 C12orf49Q9H741 205 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 CTXND1A0A1B0GTU2 59 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 hCG_38984A0A1B0GV85 526 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 GGCTO75223 188 aaKnown RBP6.43□□□□□ -1.38
NEDD9-208ENST00000504387 CBR3O75828 277 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 IL6RP08887 468 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-208ENST00000504387 WNT2P09544 360 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 COX5AP20674 150 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 LINC00310P59036 64 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 RPL15P61313 204 aaKnown RBP6.43□□□□□ -1.38
NEDD9-208ENST00000504387 SERF2P84101 59 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 ZNF585BQ52M93 769 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 COA6Q5JTJ3 125 aaKnown RBP6.43□□□□□ -1.38
NEDD9-208ENST00000504387 DNLZQ5SXM8 178 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 LINC00696Q6ZRV3 163 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 ANAPC16Q96DE5 110 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 ELOVL5Q9NYP7 299 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 TNCP24821 2201 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 ZNF253O75346 499 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 NDUFB8O95169 186 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 ARL14EPLP0DKL9 152 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 MGST1P10620 155 aaKnown RBP6.42□□□□□ -1.38
NEDD9-208ENST00000504387 CRYGSP22914 178 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 MSX1P28360 303 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 Q56UQ5 140 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 FAM27BQ5VT28 67 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 LYSMD4Q5XG99 296 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 MIC13Q5XKP0 118 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 RABEPKQ7Z6M1 372 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 OR4C5Q8NGB2 326 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 OR5A2Q8NGI9 324 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 OR10G8Q8NGN5 311 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 ABHD14BQ96IU4 210 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 RNASE7Q9H1E1 156 aaKnown RBP6.42□□□□□ -1.38
NEDD9-208ENST00000504387 KIR2DS1A0A191URI9 304 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 NPIPB13A6NJU9 1138 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 NPIPB4C9JG80 1138 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 M0QZK8 103 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 DEGS1O15121 323 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 S1PR2O95136 353 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 GRPP07492 148 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 RFPL3SP0C7P2 107 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 KIR2DS4P43632 304 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 PDLIM4P50479 330 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 KIR2DS1Q14954 304 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 SPINK14Q6IE38 97 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 LYG1Q8N1E2 194 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 C22orf15Q8WYQ4 148 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 APOBEC3DQ96AK3 386 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-208ENST00000504387 FAM122AQ96E09 287 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 SGK494Q96LW2 274 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 LRFN3Q9BTN0 628 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 SSBP3Q9BWW4 388 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-208ENST00000504387 NPCDR1Q9BY65 106 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 OR2H1Q9GZK4 316 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 OR2D2Q9H210 308 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 GNB4Q9HAV0 340 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 TCFL5Q9UL49 500 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 OR6C6A6NF89 314 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 SNAI2O43623 268 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 FOXH1O75593 365 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 CD24P25063 80 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 RPL30P62888 115 aaKnown RBP6.42□□□□□ -1.38
NEDD9-208ENST00000504387 PMCHL1Q16048 86 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 DRAM1Q8N682 238 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 OR52L2PQ8NGH6 319 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 PHF7Q9BWX1 381 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-208ENST00000504387 TMEM38BQ9NVV0 291 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 CLCF1Q9UBD9 225 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 ZFP30Q9Y2G7 519 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 WIPI2Q9Y4P8 454 aa6.42□□□□□ -1.38
NEDD9-208ENST00000504387 TRAV24A0A0B4J272 114 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 ODAMA1E959 279 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 CTSSP25774 331 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 SUMO3P55854 103 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-208ENST00000504387 CLDN15P56746 228 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 KCNMB1Q16558 191 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 SPATA31B1PQ5VZV4 182 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 LEMD1Q68G75 181 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 ZNF324BQ6AW86 544 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-208ENST00000504387 TECTBQ96PL2 329 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 NRN1Q9NPD7 142 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 PPP1R14DQ9NXH3 145 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 LAMTOR2Q9Y2Q5 125 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 CHCHD2Q9Y6H1 151 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-208ENST00000504387 TMEM250H0YL14 139 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 MRPL33O75394 65 aaKnown RBP6.41□□□□□ -1.38
NEDD9-208ENST00000504387 SRIP30626 198 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 TIMP3P35625 211 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 SRP14P37108 136 aaKnown RBP6.41□□□□□ -1.38
NEDD9-208ENST00000504387 GPR6P46095 362 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-208ENST00000504387 PLGLB1Q02325 96 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 PDLIM3Q53GG5 364 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-208ENST00000504387 REPIN1Q9BWE0 567 aaKnown RBP6.41□□□□□ -1.38
NEDD9-208ENST00000504387 ZNF586Q9NXT0 402 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 DLL3Q9NYJ7 618 aa6.41□□□□□ -1.38
NEDD9-208ENST00000504387 ATG2AQ2TAZ0 1938 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 C17orf98A8MV24 154 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 RRHO14718 337 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 HYPMO75409 117 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms