RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 OR51M1Q9H341 326 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 DIRC3C9JPN6 131 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 RECKO95980 971 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 CA2P00918 260 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 RPL24P83731 157 aaKnown RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF146Q15072 292 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 DNLZQ5SXM8 178 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 CYB561D1Q8N8Q1 229 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 LNP1A1A4G5 178 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 RPLP1P05386 114 aaKnown RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 ARL14EPLP0DKL9 152 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 COMPP49747 757 aaPredicted RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 MFAP2P55001 183 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 SNRPD3P62318 126 aaKnown RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 OR4C13Q8NGP0 309 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 GALNT14Q96FL9 552 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 GPR82Q96P67 336 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 WFDC6Q9BQY6 131 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 PARP14Q460N5 1801 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 IGKV1D-42A0A075B6H8 117 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 H7C2G1 150 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 FAM3BP58499 235 aaPredicted RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF56Q15929 161 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 PQLC2Q6ZP29 291 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 GDF15Q99988 308 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 TRAF4Q9BUZ4 470 aaPredicted RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 ALX4Q9H161 411 aaPredicted RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 KCNE5Q9UJ90 142 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 CXCL2P19875 107 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 PTGDSP41222 190 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 HSPE1P61604 102 aaKnown RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 IGLV3-21P80748 117 aaPredicted RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF818PQ6ZRF7 136 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM252Q8N6L7 170 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 MAP1LC3AQ9H492 121 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF703Q9H7S9 590 aaPredicted RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 DNAJC4Q9NNZ3 241 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 GPR132Q9UNW8 380 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 NPPCP23582 126 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 TNFRSF9Q07011 255 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 PEAR1Q5VY43 1037 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 TAF15Q92804 592 aaKnown RBP eCLIP6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 Q96M66 194 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 MARCH11A6NNE9 402 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 LGALS3P17931 250 aaKnown RBP6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 UNC119Q13432 240 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 UNQ9370/PRO34162Q6UXP9 181 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 Q6ZT83 130 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 LINC00470Q9BZP3 86 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 A0A087X0M5 115 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 A0A1B0GX30 115 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 CFDP00746 253 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 RNASE1P07998 156 aaKnown RBP6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 NPBWR2P48146 333 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 P2RY4P51582 365 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM177Q53S58 311 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 C10orf128Q5T292 105 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 SGMS2Q8NHU3 365 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 GPHA2Q96T91 129 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 TUBD1Q9UJT1 453 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 IGKV3OR2-268A0A0C4DH90 116 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 TRGV3P03979 118 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 CELA3AP09093 270 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 LBHQ53QV2 105 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 C1orf100Q5SVJ3 147 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 MEGF10Q96KG7 1140 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 TUBA4BQ9H853 241 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 LINC00862A6NCI5 91 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 FAM90A26D6RGX4 464 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 M0QZK8 103 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 GGCTO75223 188 aaKnown RBP6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 MUC1P15941 1255 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 MDKP21741 143 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 RIPPLY2Q5TAB7 128 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 FAM57AQ8TBR7 257 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 SPSB2Q99619 263 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM106BQ9NUM4 274 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 RAXQ9Y2V3 346 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 PAM16Q9Y3D7 125 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 TAF1LQ8IZX4 1826 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 SDK1Q7Z5N4 2213 aa6.13□□□□□ -1.43
SYNPO2-205ENST00000504178 C17orf51A8MQB3 221 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 H3BTX0 84 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 RFPL3SP0C7P2 107 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 TAS2R60P59551 318 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 BSPH1Q075Z2 132 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 UBE2V2Q15819 145 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 MRPL32Q9BYC8 188 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM262E9PQX1 116 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 IGKV3-20P01619 116 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 HLA-DQB1P01920 261 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 RAB9AP51151 201 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 FAM27E3Q08E93 113 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 ACP7Q6ZNF0 438 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 NEU4Q8WWR8 484 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 IGHV3-66A0A0C4DH42 116 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 F12P00748 615 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 C8orf88P0DMB2 117 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF25P17030 456 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 HIST1H1AQ02539 215 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms