RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 C5orf17Q8NAS9 161 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 ABHD6Q9BV23 337 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 PPP1R3CQ9UQK1 317 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 PRSS37A4D1T9 235 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 PRSS29PA6NIE9 313 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 GJE1A6NN92 205 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 C1QTNF9P0C862 333 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 OTX1P32242 354 aaPredicted RBP4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 RRADP55042 308 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 SRYQ05066 204 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 FMODQ06828 376 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 BAXQ07812 192 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 IZUMO4Q1ZYL8 232 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 PHLDA2Q53GA4 152 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 PRAMEF5Q5TYX0 476 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 PRAMEF6Q5VXH4 476 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 SPATA31B1PQ5VZV4 182 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 BATF2Q8N1L9 274 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 DOCK7Q96N67 2140 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 SMIM7Q9BQ49 75 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 MCRIP2Q9BUT9 160 aaKnown RBP4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 C19orf24Q9BVV8 132 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 PECRQ9BY49 303 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 STRADBQ9C0K7 418 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 PXMP4Q9Y6I8 212 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 CSMD1Q96PZ7 3565 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 CEP192Q8TEP8 1941 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGKV1D-42A0A075B6H8 117 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 TRAV36DV7A0A075B6V5 113 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGKV3D-11A0A0A0MRZ8 115 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 A0A1B0GW15 77 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 H7BYZ3 331 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 P2RY10O00398 339 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 SPINK4O60575 86 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 CLPSP04118 112 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 APOBEC3AP31941 199 aaPredicted RBP4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 DNASE1L1P49184 302 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 SPATA46Q5T0L3 261 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 C1QL2Q7Z5L3 287 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 RPS19BP1Q86WX3 136 aaKnown RBP4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 DTX1Q86Y01 620 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR8I2Q8N0Y5 310 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 FER1L6-AS1Q8NA97 138 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR2T10Q8NGZ9 312 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR4A5Q8NH83 315 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 CT55Q8WUE5 264 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR5P3Q8WZ94 311 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 ADAT3Q96EY9 351 aaPredicted RBP4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 JMJD8Q96S16 334 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 CTDSP1Q9GZU7 261 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 SIRPDQ9H106 197 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 UQCR10Q9UDW1 63 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 SS18L2Q9UHA2 77 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 DHDHQ9UQ10 334 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM131Q92545 1883 aa4.9□□□□□ -1.63
SOX2-OT-218ENST00000498731 BORCS7-ASMTA0A0B4J1R7 106 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 LY6G6EA0A0G2JKS1 128 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 SIVA1O15304 175 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 HRASP01112 189 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGKV1D-33P01593 117 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGKV1-33P01594 117 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 TTRP02766 147 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 PET100P0DJ07 73 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 BCL2P10415 239 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGLL1P15814 213 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 GUCA1AP43080 201 aaPredicted RBP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR3A4PP47883 348 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 EGR4Q05215 589 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGFBP7Q16270 282 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 MRPL23Q16540 153 aaKnown RBP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 BSXQ3C1V8 233 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 NRN1LQ496H8 165 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR4S2Q8NH73 311 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 DPF1Q92782 380 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 SMIM12Q96EX1 92 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 CHRNA10Q9GZZ6 450 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 FNDC4Q9H6D8 234 aaPredicted RBP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 NPVFQ9HCQ7 196 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 GPR84Q9NQS5 396 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 SMPXQ9UHP9 88 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 COA3Q9Y2R0 106 aaPredicted RBP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 TBL2Q9Y4P3 447 aaKnown RBP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 U3KQA8 63 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 SPTBN1Q01082 2364 aaKnown RBP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 PMCHP20382 165 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 ACP1P24666 158 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 THBS3P49746 956 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 SRPXP78539 464 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM144Q7Z5S9 345 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 LFNGQ8NES3 379 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR10W1Q8NGF6 305 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 SSC4DQ8WTU2 575 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 C16orf92Q96LL3 132 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 TSPAN32Q96QS1 320 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 ABI3Q9P2A4 366 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 MEMO1Q9Y316 297 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 FER1L5A0AVI2 2057 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGHV2-26A0A0B4J1V2 119 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM212A6NML5 194 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 A8MZ25 164 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms