RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 CR1LQ2VPA4 569 aa15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 FAM201AQ5SY85 155 aa15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 MEX3BQ6ZN04 569 aaKnown RBP15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 TPRX1Q8N7U7 411 aa15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 ZNRF1Q8ND25 227 aa15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 Q8WTZ3 238 aa15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 NINJ1Q92982 152 aa15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 RBM7Q9Y580 266 aaKnown RBP15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 RFNGQ9Y644 331 aa15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 KIAA2026Q5HYC2 2103 aa15.4■□□□□ 0.06
TSPAN4-212ENST00000494815 DUXBA0A1W2PPF3 345 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 B9A039 149 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 SPINT2O43291 252 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF674Q2M3X9 581 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 SP5Q6BEB4 398 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 NEUROG1Q92886 237 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 DYNLRB1Q9NP97 96 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 DIDO1Q9BTC0 2240 aaKnown RBP15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 CXorf65A6NEN9 183 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 IGLV2-14P01704 120 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 CXCL1P09341 107 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 NKX2-1P43699 371 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 HTD2P86397 168 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 HAGHQ16775 308 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 IL22RA2Q969J5 263 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 SSX3Q99909 188 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 SLC25A31Q9H0C2 315 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 FAM234AQ9H0X4 552 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 PLEKHF2Q9H8W4 249 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 SIRT7Q9NRC8 400 aa15.39■□□□□ 0.05
TSPAN4-212ENST00000494815 C15orf65H3BRN8 121 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 SCAF4O95104 1147 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 HSPB1P04792 205 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 SSTR5P35346 364 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 DLK1P80370 383 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 TFF3Q07654 80 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 ICAM4Q14773 271 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF343Q6P1L6 599 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF429Q86V71 674 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF695Q8IW36 515 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 C1orf87Q8N0U7 546 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF665Q9H7R5 613 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 LYRM2Q9NU23 88 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 MSMO1Q15800 293 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF506Q5JVG8 444 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF788Q6ZQV5 615 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 REC114Q7Z4M0 266 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 ZCCHC24Q8N2G6 241 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 TVP23CQ96ET8 276 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 ABHD14BQ96IU4 210 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 SPIN2AQ99865 258 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 SPIN2BQ9BPZ2 258 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 OR6C3Q9NZP0 311 aa15.38■□□□□ 0.05
TSPAN4-212ENST00000494815 PKDREJQ9NTG1 2253 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 SEC14L6B5MCN3 397 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 TNFSF12O43508 249 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF383Q8NA42 475 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 ZBTB34Q8NCN2 500 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 OR52L2PQ8NGH6 319 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 RNASE11Q8TAA1 199 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 GAFA1Q96PS6 74 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 CISD1Q9NZ45 108 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 KCNS2Q9ULS6 477 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 NBEAQ8NFP9 2946 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 DYSFO75923 2080 aa15.37■□□□□ 0.05
TSPAN4-212ENST00000494815 SIAH2O43255 324 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 CEBPGP53567 150 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 ERVFRD-1P60508 538 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 RAB4BP61018 213 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 SELENOHQ8IZQ5 122 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 TMEM252Q8N6L7 170 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF645Q8N7E2 425 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 CYB561D1Q8N8Q1 229 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 FAM216AQ8WUB2 273 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 GNPNAT1Q96EK6 184 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 GPHA2Q96T91 129 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 NIPSNAP3BQ9BS92 247 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 TRAV38-1A0A0B4J264 116 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 SSSCA1O60232 199 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST1H2BKO60814 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST1H2BJP06899 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 OMGP23515 440 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST1H2BOP23527 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST1H2BBP33778 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 EDDM3BP56851 147 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST1H2BDP58876 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST1H2BCP62807 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST2H2BEQ16778 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 TGIF2LYQ8IUE0 185 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 DRAM1Q8N682 238 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 DEFB108BQ8NET1 73 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 OR5C1Q8NGR4 320 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 OR13D1Q8NGV5 346 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST1H2BHQ93079 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 RBMXL1Q96E39 390 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST1H2BNQ99877 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 HIST1H2BMQ99879 126 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 SPOCK3Q9BQ16 436 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 TMEM204Q9BSN7 226 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms