RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 FAM182BQ5T319 152 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 SAMD5Q5TGI4 173 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 AMTNQ6UX39 209 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.43□□□□□ -1.86
ATG3-207ENST00000494571 LHFPL1Q86WI0 220 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 KRTAP19-1Q8IUB9 90 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 C8orf46Q8TAG6 207 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 GLMPQ8WWB7 406 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 APOBEC3DQ96AK3 386 aaPredicted RBP3.43□□□□□ -1.86
ATG3-207ENST00000494571 CNRIP1Q96F85 164 aaPredicted RBP3.43□□□□□ -1.86
ATG3-207ENST00000494571 DGAT2Q96PD7 388 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 PKIBQ9C010 78 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 NAA60Q9H7X0 242 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 ENY2Q9NPA8 101 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 SPANXB1Q9NS25 103 aaPredicted RBP3.43□□□□□ -1.86
ATG3-207ENST00000494571 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.43□□□□□ -1.86
ATG3-207ENST00000494571 ONECUT1Q9UBC0 465 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 TAC3Q9UHF0 121 aa3.43□□□□□ -1.86
ATG3-207ENST00000494571 UBE2J1Q9Y385 318 aaPredicted RBP3.43□□□□□ -1.86
ATG3-207ENST00000494571 F11RQ9Y624 299 aaKnown RBP3.43□□□□□ -1.86
ATG3-207ENST00000494571 PHF3Q92576 2039 aaKnown RBP3.43□□□□□ -1.86
ATG3-207ENST00000494571 SNRNP200O75643 2136 aaKnown RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 TRAV1-1A0A0B4J248 108 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 GAGE12JA6NER3 117 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 PRSS29PA6NIE9 313 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 C11orf98E9PRG8 122 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 H3BRM9 83 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 K7ERJ3 54 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 DEGS1O15121 323 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 GAGE7O76087 117 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 SLC35E2P0CK97 266 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 GAGE12FP0CL80 117 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 GAGE12GP0CL81 117 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 GAGE12IP0CL82 117 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 NPPCP23582 126 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 OR3A4PP47883 348 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 ATP5G3P48201 142 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 XGP55808 180 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 GAGE4Q13068 117 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 TMEM187Q14656 261 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 FXYD3Q14802 87 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 IZUMO4Q1ZYL8 232 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 CTXN3Q4LDR2 81 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 LIAT1Q6ZQX7 453 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 LINC00173Q6ZV60 143 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 CENPVQ7Z7K6 275 aaPredicted RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 ZNF547Q8IVP9 402 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 ZNF695Q8IW36 515 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 TCEAL8Q8IYN2 117 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 ZBTB34Q8NCN2 500 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 OR2A5Q96R48 311 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 TMEM70Q9BUB7 260 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 MCTS1Q9ULC4 181 aaKnown RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 CSDC2Q9Y534 153 aaKnown RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 R4GN57 208 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 DOCK6Q96HP0 2047 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 KIAA1671Q9BY89 1806 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 TRBV5-4A0A0C4DH59 114 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 LOC102725191A0A1B0GVB3 256 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 A0A1B0GWB2 263 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 TMEM250H0YL14 139 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 H3BMG7 143 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 TNFRSF13BO14836 293 aaPredicted RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 NDUFS4O43181 175 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 MLNRO43193 412 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 LINC00869P0C866 280 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 MFAP4P55083 255 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 TMEM50BP56557 158 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 RPS18P62269 152 aaKnown RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 SEC11AP67812 179 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 MGAT2Q10469 447 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 MYBPHQ13203 477 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 EIF3IQ13347 325 aaKnown RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 ASPHD1Q5U4P2 390 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 DOK3Q7L591 496 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 SLC22A24Q8N4F4 322 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 RPP25LQ8N5L8 163 aaKnown RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 OR1L3Q8NH93 324 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 OR4C12Q96R67 309 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 CITED2Q99967 270 aaPredicted RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 FOXQ1Q9C009 403 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 HS3ST2Q9Y278 367 aa3.42□□□□□ -1.86
ATG3-207ENST00000494571 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.42□□□□□ -1.86
ATG3-207ENST00000494571 ANK1P16157 1881 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 VWC2LB2RUY7 222 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 DLL1O00548 723 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 OR7C1O76099 320 aaPredicted RBP3.41□□□□□ -1.86
ATG3-207ENST00000494571 TNFP01375 233 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 IGKV1D-33P01593 117 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 IGKV1-33P01594 117 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 CRYBB3P26998 211 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 CST5P28325 142 aaPredicted RBP3.41□□□□□ -1.86
ATG3-207ENST00000494571 KIR2DL2P43627 348 aaPredicted RBP3.41□□□□□ -1.86
ATG3-207ENST00000494571 RHOBP62745 196 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 MRPL58Q14197 206 aaKnown RBP3.41□□□□□ -1.86
ATG3-207ENST00000494571 OR8B8Q15620 311 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 VWC2Q2TAL6 325 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 MBNL2Q5VZF2 373 aaKnown RBP3.41□□□□□ -1.86
ATG3-207ENST00000494571 TMEM215Q68D42 235 aa3.41□□□□□ -1.86
ATG3-207ENST00000494571 SP5Q6BEB4 398 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms