RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ZNF207O43670 478 aaKnown RBP16.4■□□□□ 0.22
COL27A1-207ENST00000494090 ZNF826PQ6ZT77 177 aa16.4■□□□□ 0.22
COL27A1-207ENST00000494090 GDF15Q99988 308 aa16.4■□□□□ 0.22
COL27A1-207ENST00000494090 M0R3E3 92 aa16.4■□□□□ 0.22
COL27A1-207ENST00000494090 RPLP1P05386 114 aaKnown RBP16.4■□□□□ 0.22
COL27A1-207ENST00000494090 MFAP2P55001 183 aa16.4■□□□□ 0.22
COL27A1-207ENST00000494090 C19orf54Q5BKX5 351 aa16.4■□□□□ 0.22
COL27A1-207ENST00000494090 CDCP2Q5VXM1 449 aa16.4■□□□□ 0.22
COL27A1-207ENST00000494090 SOSTQ9BQB4 213 aa16.4■□□□□ 0.22
COL27A1-207ENST00000494090 C19orf24Q9BVV8 132 aa16.4■□□□□ 0.22
COL27A1-207ENST00000494090 EPOPA6NHQ4 379 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 DIRC3C9JPN6 131 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 LIPFP07098 398 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 OR8A1Q8NGG7 326 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 RAX2Q96IS3 184 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 SPSB2Q99619 263 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 NPIPB9F8W1W9 429 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 TBX15Q96SF7 602 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 hCG_38984A0A1B0GV85 526 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 MDKP21741 143 aaPredicted RBP16.39■□□□□ 0.21
COL27A1-207ENST00000494090 ATP5J2P56134 94 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 TNFRSF9Q07011 255 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 TWIST1Q15672 202 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 PAM16Q9Y3D7 125 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 LOC105371242A0A075B767 164 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 ZNHIT1O43257 154 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 CD99P14209 185 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 RND3P61587 244 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 CLEC7AQ9BXN2 247 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 HSPB7Q9UBY9 170 aa16.39■□□□□ 0.21
COL27A1-207ENST00000494090 PRR19A6NJB7 356 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 MPTX1A8MV57 137 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 CSRP2Q16527 193 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 APCDD1LQ8NCL9 501 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 OR4C13Q8NGP0 309 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 IGHV3-72A0A0B4J1Y9 119 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 TMEM45BQ96B21 275 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 TMEM140Q9NV12 185 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 NAT2P11245 290 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 ZNF137PP52743 207 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 UNC119Q13432 240 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 ZNF818PQ6ZRF7 136 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 SMIM8Q96KF7 97 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 ZMAT5Q9UDW3 170 aaKnown RBP16.38■□□□□ 0.21
COL27A1-207ENST00000494090 TSPOP30536 169 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 QTRT1Q9BXR0 403 aaKnown RBP16.38■□□□□ 0.21
COL27A1-207ENST00000494090 IFITM10A6NMD0 228 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 H0YL77 283 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 ZP1P60852 638 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 ABHD12Q8N2K0 398 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 RARRES2Q99969 163 aa16.38■□□□□ 0.21
COL27A1-207ENST00000494090 RND2P52198 227 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 MEGF10Q96KG7 1140 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 SCN10AQ9Y5Y9 1956 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 IGHV1-69-2A0A0G2JMI3 117 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 SLC25A53Q5H9E4 307 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 ASPHD2Q6ICH7 369 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 HCP5Q6MZN7 132 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 LINC00114Q6XXX2 140 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 GUCD1Q96NT3 240 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 SH3BGRL3Q9H299 93 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 SEC16AO15027 2179 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 NUBP1P53384 320 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 TGIF1Q15583 401 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 AMMECR1LQ6DCA0 310 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 ZNF708P17019 499 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 CEBPDP49716 269 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-207ENST00000494090 SUCLG1P53597 346 aaKnown RBP16.37■□□□□ 0.21
COL27A1-207ENST00000494090 ATP5G2Q06055 141 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 IBA57Q5T440 356 aaKnown RBP16.37■□□□□ 0.21
COL27A1-207ENST00000494090 Q6ZT83 130 aa16.37■□□□□ 0.21
COL27A1-207ENST00000494090 SIPA1L1O43166 1804 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 CCDC88CQ9P219 2028 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 SLC25A17O43808 307 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 GCGP01275 180 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 MIC13Q5XKP0 118 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 OR1N2Q8NGR9 330 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 RALYQ9UKM9 306 aaKnown RBP16.36■□□□□ 0.21
COL27A1-207ENST00000494090 NPBWR2P48146 333 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 RELQ04864 619 aaPredicted RBP16.36■□□□□ 0.21
COL27A1-207ENST00000494090 ZNF841Q6ZN19 808 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 ZCCHC14Q8WYQ9 949 aaKnown RBP16.36■□□□□ 0.21
COL27A1-207ENST00000494090 UBE2L6O14933 153 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 PPP1R32Q7Z5V6 425 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 COL25A1Q9BXS0 654 aaPredicted RBP16.36■□□□□ 0.21
COL27A1-207ENST00000494090 CHODLQ9H9P2 273 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 C17orf51A8MQB3 221 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 DNAJC4Q9NNZ3 241 aa16.36■□□□□ 0.21
COL27A1-207ENST00000494090 TPRP12270 2363 aaKnown RBP16.36■□□□□ 0.21
COL27A1-207ENST00000494090 LOC101059948A0A1B0GTJ6 334 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 OR1P1Q8NH06 330 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 GALNT14Q96FL9 552 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 GPHA2Q96T91 129 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 AICDAQ9GZX7 198 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 MARCH11A6NNE9 402 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 TFPI2P48307 235 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 TIMM23BQ5SRD1 257 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 IL17BQ9UHF5 180 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 DNAJC13O75165 2243 aa16.35■□□□□ 0.21
COL27A1-207ENST00000494090 IGKV3D-11A0A0A0MRZ8 115 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms