RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 KIR2DS4P43632 304 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 RPS16P62249 146 aaKnown RBP9.8□□□□□ -0.84
BRCA1-222ENST00000493919 SLC25A35Q3KQZ1 300 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 PAQR6Q6TCH4 344 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 LCNL1Q6ZST4 164 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 TMEM99Q8N816 258 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 OR5AU1Q8NGC0 362 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 TMEM255BQ8WV15 326 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 TMEM170AQ8WVE7 144 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 POLR2J3Q9H1A7 115 aaKnown RBP9.8□□□□□ -0.84
BRCA1-222ENST00000493919 BANF2Q9H503 90 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 WDR76Q9H967 626 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 AMBNQ9NP70 447 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 MRPS28Q9Y2Q9 187 aaKnown RBP9.8□□□□□ -0.84
BRCA1-222ENST00000493919 SF3B6Q9Y3B4 125 aaKnown RBP9.8□□□□□ -0.84
BRCA1-222ENST00000493919 LYPD3O95274 346 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 CD99P14209 185 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 KIR2DL2P43627 348 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-222ENST00000493919 SOHLH1Q5JUK2 328 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 DEFB125Q8N687 156 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 OR5A1Q8NGJ0 315 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 MFSD8Q8NHS3 518 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 TMED6Q8WW62 240 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 DNAJC30Q96LL9 226 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 PSMG3-AS1Q96PY0 264 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 PRSS27Q9BQR3 290 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 SLC25A21Q9BQT8 299 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-222ENST00000493919 OR51I2Q9H344 312 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 HINT3Q9NQE9 182 aaKnown RBP9.8□□□□□ -0.84
BRCA1-222ENST00000493919 FBLN5Q9UBX5 448 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 PROCRQ9UNN8 238 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 IRGMA1A4Y4 181 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 LRP5LA4QPB2 252 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 FTCDNL1E5RQL4 147 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 HYPMO75409 117 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 ABHD16AO95870 558 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 HLA-DPB1P04440 258 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 THBDP07204 575 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 ADRA2CP18825 462 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 GRNP28799 593 aaKnown RBP9.79□□□□□ -0.84
BRCA1-222ENST00000493919 TSPOP30536 169 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 GRPRP30550 384 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 HINT1P49773 126 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-222ENST00000493919 RHOBP62745 196 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 SUMO1P63165 101 aaKnown RBP9.79□□□□□ -0.84
BRCA1-222ENST00000493919 COL10A1Q03692 680 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 OR2T33Q8NG76 320 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 OR10G9Q8NGN4 311 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 PFN4Q8NHR9 129 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 IL22RA2Q969J5 263 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 STARD4Q96DR4 205 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 ANAPC13Q9BS18 74 aa9.79□□□□□ -0.84
BRCA1-222ENST00000493919 CENPEQ02224 2701 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 ANKRD30BLA7E2S9 258 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 C19orf84I3L1E1 186 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 RAB27BO00194 218 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 FFAR1O14842 300 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 EIF4EP06730 217 aaKnown RBP9.78□□□□□ -0.84
BRCA1-222ENST00000493919 COL8A1P27658 744 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 FOXG1P55316 489 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-222ENST00000493919 DGCR2P98153 550 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 GUSBP1Q15486 140 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 TP53I3Q53FA7 332 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 FAM162BQ5T6X4 162 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 ZNF676Q8N7Q3 588 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 KIR2DL5BQ8NHK3 375 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 NEU4Q8WWR8 484 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-222ENST00000493919 MCRIP2Q9BUT9 160 aaKnown RBP9.78□□□□□ -0.84
BRCA1-222ENST00000493919 PIGLQ9Y2B2 252 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 FLNBO75369 2602 aaKnown RBP9.78□□□□□ -0.84
BRCA1-222ENST00000493919 A0A1W2PRE2 83 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 ODAMA1E959 279 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 NPIPB13A6NJU9 1138 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 NPIPB4C9JG80 1138 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 LPAR6P43657 344 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 CX3CR1P49238 355 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 SPATA31B1PQ5VZV4 182 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 HIST2H2BCQ6DN03 193 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 LINC00114Q6XXX2 140 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 CENPVQ7Z7K6 275 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-222ENST00000493919 PAQR4Q8N4S7 273 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-222ENST00000493919 LHX4Q969G2 390 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 UHRF2Q96PU4 802 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 REEP1Q9H902 201 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 MED31Q9Y3C7 131 aa9.78□□□□□ -0.84
BRCA1-222ENST00000493919 RPL36Q9Y3U8 105 aaKnown RBP9.78□□□□□ -0.84
BRCA1-222ENST00000493919 CD5LO43866 347 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 BGLAPP02818 100 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 H1F0P07305 194 aaKnown RBP9.77□□□□□ -0.85
BRCA1-222ENST00000493919 CD33P20138 364 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 FAUP35544 74 aaKnown RBP9.77□□□□□ -0.85
BRCA1-222ENST00000493919 RPL8P62917 257 aaKnown RBP9.77□□□□□ -0.85
BRCA1-222ENST00000493919 PSG9Q00887 426 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 LTBQ06643 244 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 TFF3Q07654 80 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF74Q16587 644 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 SFRP4Q6FHJ7 346 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-222ENST00000493919 Q6ZVH6 145 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 SUMF2Q8NBJ7 301 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms