RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 COQ3Q9NZJ6 369 aa8.91□□□□□ -0.98
PHACTR4-204ENST00000493669 RAI1Q7Z5J4 1906 aaPredicted RBP8.91□□□□□ -0.98
PHACTR4-204ENST00000493669 TRAV1-1A0A0B4J248 108 aa8.9□□□□□ -0.98
PHACTR4-204ENST00000493669 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.98
PHACTR4-204ENST00000493669 TMPRSS2O15393 492 aa8.9□□□□□ -0.98
PHACTR4-204ENST00000493669 H2AFB1P0C5Y9 115 aa8.9□□□□□ -0.98
PHACTR4-204ENST00000493669 RUNX1Q01196 453 aa8.9□□□□□ -0.98
PHACTR4-204ENST00000493669 RPL39P5Q59GN2 51 aa8.9□□□□□ -0.98
PHACTR4-204ENST00000493669 SP5Q6BEB4 398 aaPredicted RBP8.9□□□□□ -0.98
PHACTR4-204ENST00000493669 WDR61Q9GZS3 305 aaKnown RBP8.9□□□□□ -0.98
PHACTR4-204ENST00000493669 KIAA1456Q9P272 454 aa8.9□□□□□ -0.98
PHACTR4-204ENST00000493669 TNFRSF13BO14836 293 aaPredicted RBP8.9□□□□□ -0.99
PHACTR4-204ENST00000493669 SLC31A2O15432 143 aa8.9□□□□□ -0.99
PHACTR4-204ENST00000493669 NDUFA2O43678 99 aa8.9□□□□□ -0.99
PHACTR4-204ENST00000493669 PRAMEF5Q5TYX0 476 aa8.9□□□□□ -0.99
PHACTR4-204ENST00000493669 C17orf50Q8WW18 174 aa8.9□□□□□ -0.99
PHACTR4-204ENST00000493669 RBMXL1Q96E39 390 aaKnown RBP8.9□□□□□ -0.99
PHACTR4-204ENST00000493669 TMEM147Q9BVK8 224 aa8.9□□□□□ -0.99
PHACTR4-204ENST00000493669 DCAF16Q9NXF7 216 aa8.9□□□□□ -0.99
PHACTR4-204ENST00000493669 KAAG1Q9UBP8 84 aa8.9□□□□□ -0.99
PHACTR4-204ENST00000493669 SAA2-SAA4A0A096LPE2 208 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 CCL21O00585 134 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 RBMXL2O75526 392 aaKnown RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 SAA2P0DJI9 122 aaPredicted RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 DAOP14920 347 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 NDUFB7P17568 137 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 SPCS3P61009 180 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 RPP30P78346 268 aaKnown RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 MRPS11P82912 194 aaKnown RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 SPSB3Q6PJ21 355 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 SLC25A48Q6ZT89 311 aaKnown RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 TGIF2LYQ8IUE0 185 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 RAB39BQ96DA2 213 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 OR4C12Q96R67 309 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 ZNF251Q9BRH9 671 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 EIF5A2Q9GZV4 153 aaKnown RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 CEBPZOSA8MTT3 80 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 SFTPCP11686 197 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 GNB2P62879 340 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 CENPVQ7Z7K6 275 aaPredicted RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 ZNF429Q86V71 674 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 OR10P1Q8NGE3 313 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 OR4A16Q8NH70 328 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 CLCC1Q96S66 551 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 TLN1Q9Y490 2541 aaKnown RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 PMS2P5A8MQ11 134 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 ATXN7O15265 892 aaPredicted RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 FSTL3O95633 263 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 OR9G9P0C7N8 305 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 NFYBP25208 207 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 LINC00205P59089 165 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 RPL31P62899 125 aaKnown RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 POU2AF1Q16633 256 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 VWC2Q2TAL6 325 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 LRRC10Q5BKY1 277 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 DHRS7BQ6IAN0 325 aaPredicted RBP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 HEPN1Q6WQI6 88 aa8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 TAF15Q92804 592 aaKnown RBP eCLIP8.89□□□□□ -0.99
PHACTR4-204ENST00000493669 C9JQL5 133 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 NDUFB3O43676 98 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 LYG1Q8N1E2 194 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 C8orf31Q8N9H6 132 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 ZNF714Q96N38 554 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 QTRT1Q9BXR0 403 aaKnown RBP8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 SLC35B3Q9H1N7 401 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 FBXO7Q9Y3I1 522 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 PIEZO2Q9H5I5 2752 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 FAM90A27PA6NNH2 459 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 ARG1P05089 322 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 PPT1P50897 306 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 ZCCHC24Q8N2G6 241 aaKnown RBP8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 CCL17Q92583 94 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 TMEM140Q9NV12 185 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 RFNGQ9Y644 331 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 BSNQ9UPA5 3926 aa8.88□□□□□ -0.99
PHACTR4-204ENST00000493669 POLEQ07864 2286 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 DMXL2Q8TDJ6 3036 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 TSPAN4O14817 238 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 HRASP01112 189 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 RELBQ01201 579 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 OR8G2PQ6IF36 304 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 MBD3L1Q8WWY6 194 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 AIFM2Q9BRQ8 373 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 RSG1Q9BU20 258 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 UNKLQ9H9P5 680 aaKnown RBP8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 IGHV1-69-2A0A0G2JMI3 117 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 RBFOX3A6NFN3 312 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 SOX15O60248 233 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 IFNA17P01571 189 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 FAM71F2Q6NXP2 309 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 CLRN3Q8NCR9 226 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 LEAP2Q969E1 77 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 ICE1Q9Y2F5 2266 aa8.87□□□□□ -0.99
PHACTR4-204ENST00000493669 UBE2L5PA0A1B0GUS4 154 aa8.86□□□□□ -0.99
PHACTR4-204ENST00000493669 FAM74A7A6NL05 159 aa8.86□□□□□ -0.99
PHACTR4-204ENST00000493669 IGHV3-7P01780 117 aa8.86□□□□□ -0.99
PHACTR4-204ENST00000493669 MBP02144 154 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms