RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FBLN5Q9UBX5 448 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 LSM7Q9UK45 103 aaKnown RBP5.84□□□□□ -1.47
VPS13B-205ENST00000493587 LMX1BO60663 402 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 WNT2P09544 360 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 HLA-DOBP13765 273 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 FOXL1Q12952 345 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 TPRG1Q6ZUI0 275 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 SH2D6Q7Z4S9 175 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM70Q9BUB7 260 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 COL6A3P12111 3177 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 A0A1W2PP11 408 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 C19orf67A6NJJ6 358 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 CHST1O43916 411 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 PSG4Q00888 419 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 TM4SF20Q53R12 229 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 C5orf47Q569G3 176 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 RNFT1Q5M7Z0 435 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 C8orf86Q6ZUL3 223 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 HSD11B1LQ7Z5J1 315 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 CYB5D2Q8WUJ1 264 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 DAZLQ92904 295 aaKnown RBP5.84□□□□□ -1.47
VPS13B-205ENST00000493587 OR2A5Q96R48 311 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 RAB40CQ96S21 281 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 PLA2G2FQ9BZM2 168 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 AICDAQ9GZX7 198 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 RTTNQ86VV8 2226 aa5.84□□□□□ -1.48
VPS13B-205ENST00000493587 ADAMTS9Q9P2N4 1935 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 LAMA1P25391 3075 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 F5H5K5 113 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 LINC01565O15544 149 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 ECI1P42126 302 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 CATR1Q13166 79 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 GCSAMLQ5JQS6 135 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 LINC01590Q5TEZ4 76 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 ABHD17BQ5VST6 288 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 MFSD12Q6NUT3 480 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 SSX8Q7RTT4 187 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 TSKUQ8WUA8 353 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 H3BRM9 83 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 DEGS1O15121 323 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 ADAM20O43506 726 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 SLC35E2P0CK97 266 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 DAP3P51398 398 aaKnown RBP5.83□□□□□ -1.48
VPS13B-205ENST00000493587 RPS18P62269 152 aaKnown RBP5.83□□□□□ -1.48
VPS13B-205ENST00000493587 CEACAM16Q2WEN9 425 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 DCAF12Q5T6F0 453 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 TEX29Q8N6K0 151 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 GPR82Q96P67 336 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 PMCHL2Q9BQD1 86 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 S1PR5Q9H228 398 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 ENY2Q9NPA8 101 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 OBP2BQ9NPH6 170 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-205ENST00000493587 A0A1W2PPM0 123 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 FAM181BA6NEQ2 426 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 C11orf98E9PRG8 122 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 ATXN8OSP0DMR3 200 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 RHOBP62745 196 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 DPTQ07507 201 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 TMEM187Q14656 261 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 SAMD5Q5TGI4 173 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 LHFPL1Q86WI0 220 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 CA13Q8N1Q1 262 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 TPRX1Q8N7U7 411 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 ARPC1AQ92747 370 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 DDIT4LQ96D03 193 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 CNRIP1Q96F85 164 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-205ENST00000493587 TM2D1Q9BX74 207 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 COMMD5Q9GZQ3 224 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 OR10A2Q9H208 303 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 B4GALT6Q9UBX8 382 aa5.83□□□□□ -1.48
VPS13B-205ENST00000493587 UBE2L5PA0A1B0GUS4 154 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 LDB3O75112 727 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 ZIC2O95409 532 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-205ENST00000493587 ZNF726P1Q15940 193 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 C6orf15Q6UXA7 325 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-205ENST00000493587 SHISA6Q6ZSJ9 500 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 SPATA12Q7Z6I5 190 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 OR4N5Q8IXE1 308 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 SYT8Q8NBV8 401 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 MBD3L1Q8WWY6 194 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 APOBEC3DQ96AK3 386 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-205ENST00000493587 ZNF501Q96CX3 271 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-205ENST00000493587 CYYR1Q96J86 154 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 SPAG8Q99932 426 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-205ENST00000493587 SPATA25Q9BR10 227 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 MCRIP2Q9BUT9 160 aaKnown RBP5.82□□□□□ -1.48
VPS13B-205ENST00000493587 MCTS1Q9ULC4 181 aaKnown RBP5.82□□□□□ -1.48
VPS13B-205ENST00000493587 A0A1B0GWB2 263 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 GAGE12JA6NER3 117 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 H0YJW9 148 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 GAGE7O76087 117 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 ISG15P05161 165 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 GAGE12FP0CL80 117 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 GAGE12GP0CL81 117 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 GAGE12IP0CL82 117 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 IAPPP10997 89 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 PLP2Q04941 152 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 EGR4Q05215 589 aa5.82□□□□□ -1.48
VPS13B-205ENST00000493587 GAGE4Q13068 117 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms