RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 FAM216BQ8N7L0 139 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 Q8WTZ3 238 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 R3HDM4Q96D70 268 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 MEGF10Q96KG7 1140 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 IFNA17P01571 189 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 ACAA1P09110 424 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-220ENST00000492280 BCL2P10415 239 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 CCKARP32238 428 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 CD200P41217 278 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 FABP9Q0Z7S8 132 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 RHEBQ15382 184 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 CLEC12BQ2HXU8 276 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 FAM90A2PQ658T7 463 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 NIPSNAP3BQ9BS92 247 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 WASF3Q9UPY6 502 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 CEACAM4O75871 244 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 OPN1MWP04001 364 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 OPN1MW2P0DN77 364 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 OPN1MW3P0DN78 364 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 DUTP33316 252 aaKnown RBP10.32□□□□□ -0.76
HMGN1-220ENST00000492280 CCL8P80075 99 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 LHX4Q969G2 390 aa10.32□□□□□ -0.76
HMGN1-220ENST00000492280 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-220ENST00000492280 PPIHO43447 177 aaKnown RBP10.31□□□□□ -0.76
HMGN1-220ENST00000492280 MMP23AO75900 390 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 CLDN14O95500 239 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 MORN2Q502X0 79 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 PRAMEF5Q5TYX0 476 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 PRR7Q8TB68 274 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 RPUSD4Q96CM3 377 aaKnown RBP10.31□□□□□ -0.76
HMGN1-220ENST00000492280 MUCL1Q96DR8 90 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 CCL13Q99616 98 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 EGLN1Q9GZT9 426 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 COA4Q9NYJ1 87 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 KLF2Q9Y5W3 355 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-220ENST00000492280 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 GYPAP02724 150 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 HSPB1P04792 205 aaKnown RBP10.31□□□□□ -0.76
HMGN1-220ENST00000492280 HOXB1P14653 301 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-220ENST00000492280 MSMO1Q15800 293 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 PRR30Q53SZ7 412 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-220ENST00000492280 TMEM41BQ5BJD5 291 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 FFAR4Q5NUL3 377 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 OR5T1Q8NG75 326 aa10.31□□□□□ -0.76
HMGN1-220ENST00000492280 A0A1B0GW64 132 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 HBE1P02100 147 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 WNT2P09544 360 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 AGAP20933 346 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 KIAA0141Q14154 515 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-220ENST00000492280 C1orf185Q5T7R7 199 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 Q6ZS92 163 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 FAM90A1Q86YD7 464 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 WFDC8Q8IUA0 241 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 NECAP1Q8NC96 275 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 CA5BP1Q8WTZ4 195 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 TMEM204Q9BSN7 226 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 IFI27L2Q9H2X8 130 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 AURKAIP1Q9NWT8 199 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-220ENST00000492280 TRAV38-1A0A0B4J264 116 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 BTBD17A6NE02 478 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 IFNL4K9M1U5 179 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 LOXL3P58215 753 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 CISD2Q8N5K1 135 aaKnown RBP10.3□□□□□ -0.76
HMGN1-220ENST00000492280 SDSLQ96GA7 329 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 LURAP1Q96LR2 239 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 HINT2Q9BX68 163 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 SLC39A9Q9NUM3 307 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 CALYQ9NYX4 217 aa10.3□□□□□ -0.76
HMGN1-220ENST00000492280 C15orf62A8K5M9 175 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 HOXA1P49639 335 aaPredicted RBP10.29□□□□□ -0.76
HMGN1-220ENST00000492280 NKX6-1P78426 367 aaPredicted RBP10.29□□□□□ -0.76
HMGN1-220ENST00000492280 ELOBQ15370 118 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 PDZD11Q5EBL8 140 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 TIMM23BQ5SRD1 257 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 ABHD12Q8N2K0 398 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 OR10P1Q8NGE3 313 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 SNIP1Q8TAD8 396 aaKnown RBP10.29□□□□□ -0.76
HMGN1-220ENST00000492280 TVP23CQ96ET8 276 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 NPCDR1Q9BY65 106 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 SPTAN1Q13813 2472 aaKnown RBP10.29□□□□□ -0.76
HMGN1-220ENST00000492280 HRNRQ86YZ3 2850 aaPredicted RBP10.29□□□□□ -0.76
HMGN1-220ENST00000492280 RRHO14718 337 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 YIF1AO95070 293 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 OR8U8P0C7N1 319 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 FOLR2P14207 255 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 UBE2G2P60604 165 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 RTP5Q14D33 572 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 C4orf17Q53FE4 359 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 KHDC3LQ587J8 217 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 NANPQ8TBE9 248 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 FAM122AQ96E09 287 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 YPEL4Q96NS1 127 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 PATZ1Q9HBE1 687 aaKnown RBP10.29□□□□□ -0.76
HMGN1-220ENST00000492280 GCM1Q9NP62 436 aa10.29□□□□□ -0.76
HMGN1-220ENST00000492280 C5orf52A6NGY3 159 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 MGST3O14880 152 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 CYB5BO43169 146 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 IFNA10P01566 189 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 IGHV1-46P01743 117 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 CD81P60033 236 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms