RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CEACAM18A8MTB9 384 aa12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 UBE2L3P68036 154 aaKnown RBP12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 PRB3Q04118 309 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 PLAC9Q5JTB6 97 aa12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 DHRS7BQ6IAN0 325 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 MS4A10Q96PG2 267 aa12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 TMEM140Q9NV12 185 aa12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 OPN4Q9UHM6 478 aa12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 KPTNQ9Y664 436 aa12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 LINC00312Q9Y6C7 94 aa12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 C5orf42Q9H799 3197 aa12.13□□□□□ -0.47
ARHGEF39-205ENST00000490638 MARCH11A6NNE9 402 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 USF1P22415 310 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 P2RY1P47900 373 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 SPCS3P61009 180 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 WFDC3Q8IUB2 231 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 PRR14LQ5THK1 2151 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 XKRY2A2RUG3 117 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 SULT1A1P50225 295 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 PJVKQ0ZLH3 352 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 CLEC5AQ9NY25 188 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 PTBP3O95758 552 aaKnown RBP12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 BTF3L4Q96K17 158 aa12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 ZNF331Q9NQX6 463 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF39-205ENST00000490638 KBTBD11O94819 623 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 RPL39P5Q59GN2 51 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 IGF2-ASQ6U949 168 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 TM2D1Q9BX74 207 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 BIN3Q9NQY0 253 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 RPL35P42766 123 aaKnown RBP12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 HSPE1P61604 102 aaKnown RBP12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 B2MP61769 119 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 OR1L6Q8NGR2 347 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 LY6HO94772 140 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 TFF1P04155 84 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 OR5B3Q8NH48 314 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 CHRDL1Q9BU40 450 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 U3KQ87 197 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 TLN2Q9Y4G6 2542 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 CCL1P22362 96 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 TEPPQ6URK8 271 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 SAMD10Q9BYL1 202 aa12.11□□□□□ -0.47
ARHGEF39-205ENST00000490638 FREM1Q5H8C1 2179 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 NAT1P18440 290 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 FXYD3Q14802 87 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 VKORC1L1Q8N0U8 176 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 NEUROG1Q92886 237 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 SMCO4Q9NRQ5 59 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 JMJD1CQ15652 2540 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 MYLKQ15746 1914 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 PLXNA2O75051 1894 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 S1PR2O95136 353 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 HLA-GP17693 338 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 OR4A5Q8NH83 315 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 PLAURQ03405 335 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 CLEC12BQ2HXU8 276 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 TMEM41BQ5BJD5 291 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 ARFGEF3Q5TH69 2177 aa12.1□□□□□ -0.47
ARHGEF39-205ENST00000490638 SRRM5B3KS81 715 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 SCO1O75880 301 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 IGFBP3P17936 291 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 EWSR1Q01844 656 aaKnown RBP eCLIP12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 MIDNQ504T8 468 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 PFDN5Q99471 154 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 DENND4CQ5VZ89 1909 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 A0A1W2PNU3 283 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 CORTO00230 105 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 CEACAM8P31997 349 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 DSCR9P59020 149 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 NCMAPQ5T1S8 102 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 ZNF818PQ6ZRF7 136 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 ATP5SQ99766 215 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 QTRT1Q9BXR0 403 aaKnown RBP12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 TECRQ9NZ01 308 aaKnown RBP12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 PLXND1Q9Y4D7 1925 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 VSIG10L2P0DP72 767 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 ADIPOQQ15848 244 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 SMUG1Q53HV7 270 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 MBNL2Q5VZF2 373 aaKnown RBP12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 FBXL15Q9H469 300 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 ADAMTS9Q9P2N4 1935 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 ETV2O00321 342 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 P2RY4P51582 365 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 S100A12P80511 92 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 EFNB1P98172 346 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 PLPPR1Q8TBJ4 325 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 CXorf58Q96LI9 332 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 RNF2Q99496 336 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 NPVFQ9HCQ7 196 aa12.09□□□□□ -0.47
ARHGEF39-205ENST00000490638 SELLP14151 372 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 SSX7Q7RTT5 188 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 OR4P4Q8NGL7 312 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 HMSDA8MTL9 139 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 TRIM77I1YAP6 450 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 ZNF90Q03938 601 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 GPR146Q96CH1 333 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms