RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PRNDQ9UKY0 176 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 SSR3Q9UNL2 185 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 DHX57Q6P158 1386 aaKnown RBP2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 YTHDC2Q9H6S0 1430 aaKnown RBP2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 TRAV26-2A0A0B4J265 109 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 IGHV1OR15-9A0A0B4J2B8 117 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 TRAPPC13A5PLN9 417 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR5H1A6NKK0 313 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR4C45A6NMZ5 311 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 E7EQ34 232 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 H7C1C5 153 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 SCO1O75880 301 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 CRYZL1O95825 349 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 IGHV3-11P01762 117 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 IGHMP01871 453 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 HLA-DRB1P01911 266 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 SPI1P17947 270 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 CCL1P22362 96 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 GABRA3P34903 492 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 LCN6P62502 163 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 GNG5P63218 68 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 KCNJ8Q15842 424 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMEM241Q24JQ0 296 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 KLHL12Q53G59 568 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 SLC25A29Q8N8R3 303 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 GDPD1Q8N9F7 314 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 LY6G5BQ8NDX9 201 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 ZNF555Q8NEP9 628 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR2T27Q8NH04 317 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 FAM57AQ8TBR7 257 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 CNBD2Q96M20 576 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 PFDN5Q99471 154 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMEM147Q9BVK8 224 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 FGF23Q9GZV9 251 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 MED28Q9H204 178 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 SH3BGRL3Q9H299 93 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR52D1Q9H346 318 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 PLEKHF2Q9H8W4 249 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 ACER3Q9NUN7 267 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 DNAJC12Q9UKB3 198 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 COL1A2P08123 1366 aa2.68□□□□□ -1.98
HMGB1P38-201ENST00000490557 RTL1A6NKG5 1358 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 IGLV3-12A0A075B6K2 115 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMED7-TICAM2A0A0A6YYA0 188 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 ARL5CA6NH57 179 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 H3BSA7 217 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 AIPO00170 330 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 NDUFA2O43678 99 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 DEDDO75618 318 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 CDRT1O95170 752 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 NDUFC2O95298 119 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 CCNE2O96020 404 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 IGHG2P01859 326 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 C1QBP02746 253 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 MAS1P04201 325 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 HLA-DQB2P05538 268 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 S100A2P29034 98 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR10J1P30954 320 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 GLRXP35754 106 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 NUDT2P50583 147 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 DEFA1P59665 94 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 KRTAP10-1P60331 282 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 CDC42P60953 191 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 ATP5G2Q06055 141 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 BTN1A1Q13410 526 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 DEFB115Q30KQ5 88 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 KPRPQ5T749 579 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 EBLN2Q6P2I7 272 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 DAZ4Q86SG3 579 aaKnown RBP2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 CLVS1Q8IUQ0 354 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 YIPF7Q8N8F6 280 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 ZDHHC22Q8N966 263 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR2M3Q8NG83 312 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR9A2Q8NGT5 310 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 ABHD14BQ96IU4 210 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 DNAJC30Q96LL9 226 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 EFCAB11Q9BUY7 163 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 MS4A8Q9BY19 250 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 COMMD5Q9GZQ3 224 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 CCDC90BQ9GZT6 254 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 ALX4Q9H161 411 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 LRTM1Q9HBL6 345 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 DAZ1Q9NQZ3 744 aaKnown RBP2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 MED29Q9NX70 200 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 DHCR7Q9UBM7 475 aaKnown RBP2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 ANAPC10Q9UM13 185 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 PLCH2O75038 1416 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 DCCP43146 1447 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 ADAMTS13Q76LX8 1427 aa2.67□□□□□ -1.98
HMGB1P38-201ENST00000490557 hCG_1818297A0A087WSY0 165 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 IGHV1-69-2A0A0G2JMI3 117 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 A0A1W2PRE2 83 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 A8MT66 165 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 C4orf51C9J302 202 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 PIRO00625 290 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 CCNKO75909 580 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 CXorf1O96002 111 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 SEC11BP0C7V7 166 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 ZNF688P0C7X2 276 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms