RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 PLA2G5P39877 138 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 CNN1P51911 297 aaKnown RBP16.39■□□□□ 0.21
HMG20B-213ENST00000488973 VWC2Q2TAL6 325 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 UBALD1Q8TB05 177 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 MIEN1Q9BRT3 115 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 NPCDR1Q9BY65 106 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 CCL25O15444 150 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 CFIP05156 583 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 ZNF709Q8N972 641 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 CSTL1Q9H114 145 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 AURKAIP1Q9NWT8 199 aaPredicted RBP16.38■□□□□ 0.21
HMG20B-213ENST00000488973 CLN8Q9UBY8 286 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 MLNRO43193 412 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 RAMP3O60896 148 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 HPRT1P00492 218 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 SERPINA7P05543 415 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 ERVK11-1P61568 191 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 GNB2P62879 340 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 MRPL41Q8IXM3 137 aaKnown RBP16.38■□□□□ 0.21
HMG20B-213ENST00000488973 GBGT1Q8N5D6 347 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 TNFRSF14Q92956 283 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 RTL8AQ9BWD3 113 aa16.38■□□□□ 0.21
HMG20B-213ENST00000488973 ODAMA1E959 279 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 KRASP01116 189 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 OR10J1P30954 320 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 G6PCP35575 357 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 TNFSF10P50591 281 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 TFF3Q07654 80 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 CIB3Q96Q77 187 aaPredicted RBP16.37■□□□□ 0.21
HMG20B-213ENST00000488973 C20orf144Q9BQM9 153 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 POLDIP2Q9Y2S7 368 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 C11orf94C9JXX5 98 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 C17orf112F2Z3M2 114 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 CHRNB4P30926 498 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 ZNF146Q15072 292 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 C1orf185Q5T7R7 199 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 IMMP2LQ96T52 175 aa16.37■□□□□ 0.21
HMG20B-213ENST00000488973 ALKBH7Q9BT30 221 aaPredicted RBP16.37■□□□□ 0.21
HMG20B-213ENST00000488973 ZNF703Q9H7S9 590 aaPredicted RBP16.37■□□□□ 0.21
HMG20B-213ENST00000488973 USF3Q68DE3 2245 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 NPPCP23582 126 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 EIF4EBP1Q13541 118 aaPredicted RBP16.36■□□□□ 0.21
HMG20B-213ENST00000488973 SPINK14Q6IE38 97 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 VHLLQ6RSH7 139 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 FAM173AQ9BQD7 235 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 TMPRSS2O15393 492 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 PDE6DO43924 150 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 IL3RAP26951 378 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 RPL15P61313 204 aaKnown RBP16.36■□□□□ 0.21
HMG20B-213ENST00000488973 PMP22Q01453 160 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 CFAP161Q6P656 301 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 SCCPDHQ8NBX0 429 aa16.36■□□□□ 0.21
HMG20B-213ENST00000488973 PCSK5Q92824 1860 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 CBY3A6NI87 242 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 SH2D1BO14796 132 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 CDC34P49427 236 aaPredicted RBP16.35■□□□□ 0.21
HMG20B-213ENST00000488973 DUSP3P51452 185 aaPredicted RBP16.35■□□□□ 0.21
HMG20B-213ENST00000488973 CATR1Q13166 79 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 RNF151Q2KHN1 245 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 TMEM249Q2WGJ8 235 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 TMEM144Q7Z5S9 345 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 WDR86Q86TI4 376 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 LINC01551Q86U37 167 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 MYPOPQ86VE0 399 aaPredicted RBP16.35■□□□□ 0.21
HMG20B-213ENST00000488973 OR2M7Q8NG81 312 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 NUDT11Q96G61 164 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 FKBP11Q9NYL4 201 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 KCNIP1Q9NZI2 227 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 B4GALT7Q9UBV7 327 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 C1QTNF9BB2RNN3 333 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 ZG16O60844 167 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 CER1O95813 267 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 CD46P15529 392 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 RPL30P62888 115 aaKnown RBP16.35■□□□□ 0.21
HMG20B-213ENST00000488973 ZNF816Q0VGE8 651 aaPredicted RBP16.35■□□□□ 0.21
HMG20B-213ENST00000488973 IGFBP7Q16270 282 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 PRSS8Q16651 343 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 FAM78BQ5VT40 261 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 OR1L1Q8NH94 360 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 OR2D2Q9H210 308 aa16.35■□□□□ 0.21
HMG20B-213ENST00000488973 RAB29O14966 203 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 CELA3AP09093 270 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 PPP1CBP62140 327 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 RANP62826 216 aaKnown RBP16.34■□□□□ 0.21
HMG20B-213ENST00000488973 FOXL1Q12952 345 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 SLC35E1Q96K37 410 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 DOCK7Q96N67 2140 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 GP6Q9HCN6 339 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 S1PR2O95136 353 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 CLDN14O95500 239 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 MT-CO3P00414 261 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 TCTEX1D1Q8N7M0 179 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 OR2D3Q8NGH3 330 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 GALMQ96C23 342 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 WDYHV1Q96HA8 205 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 TRAPPC1Q9Y5R8 145 aa16.34■□□□□ 0.21
HMG20B-213ENST00000488973 PATE3B3GLJ2 98 aa16.33■□□□□ 0.2
HMG20B-213ENST00000488973 UBE2V1Q13404 147 aa16.33■□□□□ 0.2
HMG20B-213ENST00000488973 LYG1Q8N1E2 194 aa16.33■□□□□ 0.2
HMG20B-213ENST00000488973 RAB1CQ92928 201 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms