RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TAGLN2P37802 199 aaKnown RBP2.01□□□□□ -2.09
ITGB1-214ENST00000488427 SELENBP1Q13228 472 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 TRMT5Q32P41 509 aaKnown RBP2.01□□□□□ -2.09
ITGB1-214ENST00000488427 KLHL12Q53G59 568 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 CPTPQ5TA50 214 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 DUPD1Q68J44 220 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 PTRHD1Q6GMV3 140 aaKnown RBP2.01□□□□□ -2.09
ITGB1-214ENST00000488427 DEGS2Q6QHC5 323 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 C10orf99Q6UWK7 81 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 SSX9Q7RTT3 188 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 OR7G1Q8NGA0 311 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 RXFP4Q8TDU9 374 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 RORBQ92753 470 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 MS4A6EQ96DS6 147 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 SEC22CQ9BRL7 303 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 SHANK2-AS3Q9BTD1 123 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 EMC6Q9BV81 110 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 TMED9Q9BVK6 235 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 TMEM106BQ9NUM4 274 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 ZNF229Q9UJW7 825 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 CTAGE15A4D2H0 777 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 OR51F1A6NGY5 319 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 A8MWL6 223 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 F8VZ95 297 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 PRMT5O14744 637 aaPredicted RBP2□□□□□ -2.09
ITGB1-214ENST00000488427 IFNA4P05014 189 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 CBR1P16152 277 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 ELK4P28324 431 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 MPIP34949 423 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 APLNRP35414 380 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 ARR3P36575 388 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 ARF6P62330 175 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 BLCAPP62952 87 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 REEP5Q00765 189 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 TNFRSF9Q07011 255 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 MOGQ16653 247 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 ZNF829Q3KNS6 432 aaPredicted RBP2□□□□□ -2.09
ITGB1-214ENST00000488427 ARHGAP11BQ3KRB8 267 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 TMEM176BQ3YBM2 270 aaPredicted RBP2□□□□□ -2.09
ITGB1-214ENST00000488427 SPANXN2Q5MJ10 180 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 VMO1Q7Z5L0 202 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 CTAGE6Q86UF2 777 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 KRTAP13-1Q8IUC0 172 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 OR52K1Q8NGK4 314 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 LRRC39Q96DD0 335 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 ALS2CR12Q96Q35 445 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 TSPAN32Q96QS1 320 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 CHP1Q99653 195 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 AIF1LQ9BQI0 150 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 FAM192AQ9GZU8 254 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 CXorf21Q9HAI6 301 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 RRAGDQ9NQL2 400 aaPredicted RBP2□□□□□ -2.09
ITGB1-214ENST00000488427 NLE1Q9NVX2 485 aaPredicted RBP2□□□□□ -2.09
ITGB1-214ENST00000488427 APLNQ9ULZ1 77 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 LRRC42Q9Y546 428 aa2□□□□□ -2.09
ITGB1-214ENST00000488427 IGLV3-9A0A075B6K5 115 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 IGLV3-32A0A0A0MS00 114 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 IGLL5B9A064 214 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 H7C1H1 209 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 CCNB2O95067 398 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 SCELO95171 688 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 CNIH1O95406 144 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 GPR75O95800 540 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 IGHV1-46P01743 117 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 MAS1P04201 325 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 SLC35E2BP0CK96 405 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 ZNF35P13682 527 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 CSNK2A2P19784 350 aaPredicted RBP1.99□□□□□ -2.09
ITGB1-214ENST00000488427 RAB5AP20339 215 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 NTF3P20783 257 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 HLA-DMAP28067 261 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 PPICP45877 212 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 RGS6P49758 472 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 RAB7AP51149 207 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 TAS2R43P59537 309 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 GLO1Q04760 184 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 EXOC3L4Q17RC7 722 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 DEFB136Q30KP8 78 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 METAP1DQ6UB28 335 aaPredicted RBP1.99□□□□□ -2.09
ITGB1-214ENST00000488427 LYG2Q86SG7 212 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 PHF13Q86YI8 300 aaPredicted RBP1.99□□□□□ -2.09
ITGB1-214ENST00000488427 ZNF283Q8N7M2 679 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 ATP6V1C2Q8NEY4 427 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 MARVELD1Q9BSK0 173 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 SIGLEC7Q9Y286 467 aa1.99□□□□□ -2.09
ITGB1-214ENST00000488427 GOLGA8KD6RF30 607 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 GOLGA8TH3BQL2 631 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 FADS1O60427 444 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 OR2F2O95006 317 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 TTC4O95801 387 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 PFN1P07737 140 aaKnown RBP1.98□□□□□ -2.09
ITGB1-214ENST00000488427 P0DMU3 169 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 FAM231AP0DMU4 169 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 FAM231CP0DMU5 169 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 CRISP1P54107 249 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 PSPHP78330 225 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 FOXF1Q12946 379 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 KLRD1Q13241 179 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 STK38Q15208 465 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 MRPL23Q16540 153 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms