RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CCDC12Q8WUD4 166 aaPredicted RBP0.26□□□□□ -2.37
SMC4-219ENST00000487747 MBD3L1Q8WWY6 194 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 TLCD1Q96CP7 247 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 MS4A6EQ96DS6 147 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 ADAT1Q9BUB4 502 aaKnown RBP0.26□□□□□ -2.37
SMC4-219ENST00000487747 ASCL3Q9NQ33 180 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 TAAR3PQ9P1P4 343 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.26□□□□□ -2.375e-47■■■■■ 274.1
SMC4-219ENST00000487747 POLR3HQ9Y535 204 aaPredicted RBP0.26□□□□□ -2.37
SMC4-219ENST00000487747 RBM7Q9Y580 266 aaKnown RBP0.26□□□□□ -2.37
SMC4-219ENST00000487747 MAP3K19Q56UN5 1328 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 NAV1Q8NEY1 1877 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 NCOA6Q14686 2063 aaPredicted RBP0.25□□□□□ -2.37
SMC4-219ENST00000487747 LAMB4A4D0S4 1761 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 TMEM94Q12767 1356 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 TRAV8-1A0A0A6YYK1 113 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 OR6C6A6NF89 314 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 C9JCJ5 164 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 M0R381 172 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 MT-CO2P00403 227 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 CRPP02741 224 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 RPSAP08865 295 aaKnown RBP0.25□□□□□ -2.37
SMC4-219ENST00000487747 CD79BP40259 229 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 FKBP1AP62942 108 aaKnown RBP0.25□□□□□ -2.37
SMC4-219ENST00000487747 SYCP1Q15431 976 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 KRTAP21-1Q3LI58 79 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 C7orf65Q6ZTY9 151 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 KRTAP19-3Q7Z4W3 81 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 ATP5L2Q7Z4Y8 100 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 ZNF675Q8TD23 568 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 ZNF514Q96K75 400 aaPredicted RBP0.25□□□□□ -2.37
SMC4-219ENST00000487747 ODF3Q96PU9 254 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 CYTH2Q99418 400 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 TTTY13Q9BZ97 58 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 EMC3Q9P0I2 261 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 GREB1Q4ZG55 1949 aa0.25□□□□□ -2.37
SMC4-219ENST00000487747 SCAF11Q99590 1463 aaKnown RBP0.24□□□□□ -2.37
SMC4-219ENST00000487747 TRAV7A0A075B6U4 112 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 IGKV2D-26A0A0A0MRZ7 120 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 A0A0D9SEW6 157 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 A0A0J9YW62 118 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 LOC100506127A0A0U1RQW1 187 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 HMSDA8MTL9 139 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 TXNDC9O14530 226 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 KLRC4O43908 158 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 CCL5P13501 91 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 CFL1P23528 166 aaKnown RBP0.24□□□□□ -2.37
SMC4-219ENST00000487747 MIPP30301 263 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 ALDH3A1P30838 453 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 EMP1P54849 157 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 AQP4P55087 323 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 FXYD7P58549 80 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 TBPL1P62380 186 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 GNA12Q03113 381 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 CDK5R1Q15078 307 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 C4orf26Q17RF5 130 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 DEFB115Q30KQ5 88 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 ARHGAP11BQ3KRB8 267 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 Q3ZCU0 254 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 FAM45BPQ6NSW5 357 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 SLC36A1Q7Z2H8 476 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 GPHB5Q86YW7 130 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 GID4Q8IVV7 300 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 BLIDQ8IZY5 108 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 DYNAPQ8N1N2 210 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 C17orf78Q8N4C9 275 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 Q8WTZ3 238 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 PPCDCQ96CD2 204 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 PARVAQ9NVD7 372 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 C22orf24Q9Y442 160 aa0.24□□□□□ -2.37
SMC4-219ENST00000487747 LRPPRCP42704 1394 aaKnown RBP0.23□□□□□ -2.37
SMC4-219ENST00000487747 OR51F1A6NGY5 319 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 MKRN2OSH3BPM6 223 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 H7C2G1 150 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 HCRTO43612 131 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 S100A9P06702 114 aaKnown RBP0.23□□□□□ -2.37
SMC4-219ENST00000487747 SYT1P21579 422 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 PSMB8P28062 276 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 CA5AP35218 305 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 TMEM33P57088 247 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 TPI1P60174 286 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 HPCAP84074 193 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 FABP5Q01469 135 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 ACSM3Q53FZ2 586 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 DCXRQ7Z4W1 244 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 BAP18Q8IXM2 172 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 PACRGLQ8N7B6 248 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 LFNGQ8NES3 379 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 OR13C8Q8NGS7 320 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 OR10D3Q8NH80 312 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 OR5AK3PQ8NH89 298 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 IMMP2LQ96T52 175 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 SIKE1Q9BRV8 207 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 TMEM208Q9BTX3 173 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 CST9LQ9H4G1 147 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 AGPAT3Q9NRZ7 376 aa0.23□□□□□ -2.37
SMC4-219ENST00000487747 PCYT1BQ9Y5K3 369 aaPredicted RBP0.23□□□□□ -2.37
SMC4-219ENST00000487747 MED12LQ86YW9 2145 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 A0A1B0GW54 56 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 METTL15A6NJ78 407 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms