RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 EDDM3AQ14507 147 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 HACD4Q5VWC8 232 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 HIST2H3AQ71DI3 136 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 VN1R4Q7Z5H5 301 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMED4Q7Z7H5 227 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR5C1Q8NGR4 320 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 CD200R1Q8TD46 325 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 DCUN1D1Q96GG9 259 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 SLC35G5Q96KT7 338 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR7D2Q96RA2 312 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 GTSF1LQ9H1H1 148 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 C11orf49Q9H6J7 331 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 LINC00527Q9UJ94 153 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 HDGFL3Q9Y3E1 203 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 YLPM1P49750 1951 aaKnown RBP1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 MYO15BQ96JP2 1530 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 ZFYVE9O95405 1425 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 ZNF532Q9HCE3 1301 aa1.64□□□□□ -2.15
HMGB1P36-201ENST00000487709 SMIM9A6NGZ8 99 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 EVPLLA8MZ36 301 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 DISC1C4P0D8 188 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 LY6LH3BQJ8 138 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 J3QKU1 62 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 PSMD12O00232 456 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 PGRMC1O00264 195 aaKnown RBP1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR2B3O76000 313 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 CNIH1O95406 144 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 G0S2P27469 103 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 CDK9P50750 372 aaKnown RBP1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 RWDD2BP57060 319 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 FABP5Q01469 135 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 ZNF117Q03924 483 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 TRMT12Q53H54 448 aaKnown RBP1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMEM97Q5BJF2 176 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 FAM78BQ5VT40 261 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 LCN8Q6JVE9 175 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 SCXQ7RTU7 201 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 DOLPP1Q86YN1 238 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 PXT1Q8NFP0 134 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR4C16Q8NGL9 310 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR10A6Q8NH74 314 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 Q8WTZ3 238 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 DIRAS2Q96HU8 199 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 ABHD14BQ96IU4 210 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR52E6Q96RD3 313 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 C1QTNF6Q9BXI9 259 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 TRIM4Q9C037 500 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 NMNAT1Q9HAN9 279 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 PSORS1C2Q9UIG4 136 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 DNAJC12Q9UKB3 198 aa1.63□□□□□ -2.15
HMGB1P36-201ENST00000487709 CACNA1GO43497 2377 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 DHRS12A0PJE2 317 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 GRIFINA4D1Z8 144 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 C17orf51A8MQB3 221 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMEM238C9JI98 176 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 CHP2O43745 196 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 NOS1APO75052 506 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 HAND1O96004 215 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 FABP1P07148 127 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 CRYGDP07320 174 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR5G3P0C626 314 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR4E1P0C645 316 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 FAM228BP0C875 321 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR13C7P0DN81 318 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 IFI30P13284 250 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 CD36P16671 472 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 ORM2P19652 201 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 MSNP26038 577 aaKnown RBP1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 PSMB3P49720 205 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 SNAP25P60880 206 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 RPS24P62847 133 aaKnown RBP1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 HLA-DRB3P79483 266 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 RPL19P84098 196 aaKnown RBP1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMEM267Q0VDI3 215 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 KRR1Q13601 381 aaKnown RBP1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 POU6F1Q14863 301 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 TAF1AQ15573 450 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 LIN52Q52LA3 116 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 MESTQ5EB52 335 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 SFXN4Q6P4A7 337 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 Q6ZRU5 148 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 ATP5L2Q7Z4Y8 100 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 AKAP14Q86UN6 197 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR6V1Q8N148 313 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 ZFAND2AQ8N6M9 145 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 UBL4BQ8N7F7 174 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 Q8NDZ9 215 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR51D1Q8NGF3 324 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR1L8Q8NGR8 309 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 ZNRF2Q8NHG8 242 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 SLC35B4Q969S0 331 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 ACY3Q96HD9 319 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 ANKRD36BP1Q96IX9 119 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 CAPZA3Q96KX2 299 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 PRRT1Q99946 306 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 KIFC1Q9BW19 673 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 GNB1LQ9BYB4 327 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 SMDT1Q9H4I9 107 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 FAM96AQ9H5X1 160 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms