RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 C17orf98A8MV24 154 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 KIR2DL2P43627 348 aaPredicted RBP9.95□□□□□ -0.82
TRA2B-214ENST00000487615 ZNF146Q15072 292 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 MYPOPQ86VE0 399 aaPredicted RBP9.95□□□□□ -0.82
TRA2B-214ENST00000487615 TMEM18Q96B42 140 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 ZNF729A6NN14 1252 aaPredicted RBP9.95□□□□□ -0.82
TRA2B-214ENST00000487615 LILRA1O75019 489 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 CXorf1O96002 111 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 FOXF2Q12947 444 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 P2RX4Q99571 388 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 DCTN5Q9BTE1 182 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 MEOX2P50222 304 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 TNXAQ16473 311 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 RNFT1Q5M7Z0 435 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 OR10A7Q8NGE5 316 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 OR2T10Q8NGZ9 312 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 ANAPC16Q96DE5 110 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 PXMP4Q9Y6I8 212 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 SPTBN1Q01082 2364 aaKnown RBP9.95□□□□□ -0.82
TRA2B-214ENST00000487615 C10orf142B7Z368 130 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 CCL21O00585 134 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 CD40P25942 277 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 GNG4P50150 75 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 PSG5Q15238 335 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 DBX2Q6ZNG2 339 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 FAM90A1Q86YD7 464 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 OR1L4Q8NGR5 311 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 FAM57AQ8TBR7 257 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 RAB24Q969Q5 203 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 DOK5Q9P104 306 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 CLCF1Q9UBD9 225 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 SHANK1Q9Y566 2161 aa9.95□□□□□ -0.82
TRA2B-214ENST00000487615 HSPE1P61604 102 aaKnown RBP9.94□□□□□ -0.82
TRA2B-214ENST00000487615 TMEM30BQ3MIR4 351 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 PLA2G2CQ5R387 149 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 Q6ZS49 121 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 RNF2Q99496 336 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 TCF19Q9Y242 345 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 NUBP1P53384 320 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 UBE2L3P68036 154 aaKnown RBP9.94□□□□□ -0.82
TRA2B-214ENST00000487615 PRR27Q6MZM9 219 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 SEBOXQ9HB31 216 aaPredicted RBP9.94□□□□□ -0.82
TRA2B-214ENST00000487615 INSIG2Q9Y5U4 225 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 IGHV1-18A0A0C4DH31 117 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 DNASE2O00115 360 aaPredicted RBP9.94□□□□□ -0.82
TRA2B-214ENST00000487615 PTBP3O95758 552 aaKnown RBP9.94□□□□□ -0.82
TRA2B-214ENST00000487615 CHRNB4P30926 498 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 CEACAM3P40198 252 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 SRSF3P84103 164 aaKnown RBP9.94□□□□□ -0.82
TRA2B-214ENST00000487615 SSX2Q16385 188 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 OR8B3Q8NGG8 313 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 OR10D4PQ8NGN7 298 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 RCC1LQ96I51 464 aaKnown RBP9.94□□□□□ -0.82
TRA2B-214ENST00000487615 OR8B2Q96RD0 313 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 CHRDL1Q9BU40 450 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 PLSCR4Q9NRQ2 329 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 ELOVL5Q9NYP7 299 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 CLN5O75503 358 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 YIF1AO95070 293 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 IGHG3P01860 377 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 RPL39P5Q59GN2 51 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 VKORC1L1Q8N0U8 176 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 CISD1Q9NZ45 108 aaKnown RBP9.94□□□□□ -0.82
TRA2B-214ENST00000487615 ZNF835Q9Y2P0 537 aa9.94□□□□□ -0.82
TRA2B-214ENST00000487615 WDR87Q6ZQQ6 2873 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 EIF3GO75821 320 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRA2B-214ENST00000487615 LYL1P12980 280 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 FABP4P15090 132 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 LRRC75BQ2VPJ9 315 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 ZNF506Q5JVG8 444 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 FAM201AQ5SY85 155 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 NCMAPQ5T1S8 102 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 ABHD17AQ96GS6 310 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 AUP1Q9Y679 476 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 DOCK10Q96BY6 2186 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 TDGF1P13385 188 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 CTRB1P17538 263 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 CTRB2Q6GPI1 263 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 C5orf24Q7Z6I8 188 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 LYPD6Q86Y78 171 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 DIDO1Q9BTC0 2240 aaKnown RBP9.93□□□□□ -0.82
TRA2B-214ENST00000487615 TRBV6-6A0A0A6YYG2 114 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 SEC14L6B5MCN3 397 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 SRSF6Q13247 344 aaKnown RBP9.93□□□□□ -0.82
TRA2B-214ENST00000487615 ACSM6Q6P461 480 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 ZDHHC16Q969W1 377 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 WFDC1Q9HC57 220 aa9.93□□□□□ -0.82
TRA2B-214ENST00000487615 ZNF525Q8N782 197 aa9.92□□□□□ -0.82
TRA2B-214ENST00000487615 OR10G8Q8NGN5 311 aa9.92□□□□□ -0.82
TRA2B-214ENST00000487615 BSCL2Q96G97 398 aaPredicted RBP9.92□□□□□ -0.82
TRA2B-214ENST00000487615 QTRT1Q9BXR0 403 aaKnown RBP9.92□□□□□ -0.82
TRA2B-214ENST00000487615 TIMM9Q9Y5J7 89 aa9.92□□□□□ -0.82
TRA2B-214ENST00000487615 PSPNO60542 156 aa9.92□□□□□ -0.82
TRA2B-214ENST00000487615 RBP4P02753 201 aa9.92□□□□□ -0.82
TRA2B-214ENST00000487615 NMSQ5H8A3 153 aa9.92□□□□□ -0.82
TRA2B-214ENST00000487615 OR5B3Q8NH48 314 aa9.92□□□□□ -0.82
TRA2B-214ENST00000487615 NDUFA2O43678 99 aa9.92□□□□□ -0.82
TRA2B-214ENST00000487615 FBP1P09467 338 aa9.92□□□□□ -0.82
TRA2B-214ENST00000487615 CT45A10P0DMU9 189 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms