RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FAM210BQ96KR6 192 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 NCOR1P1Q9H4R4 102 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 JPT1Q9UK76 154 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 ZG16O60844 167 aa21.7■■□□□ 1.06
HLA-C-208ENST00000487245 S100PP25815 95 aa21.7■■□□□ 1.06
HLA-C-208ENST00000487245 FAM57AQ8TBR7 257 aa21.7■■□□□ 1.06
HLA-C-208ENST00000487245 OR2V2Q96R30 315 aa21.7■■□□□ 1.06
HLA-C-208ENST00000487245 MANBALQ9NQG1 85 aa21.7■■□□□ 1.06
HLA-C-208ENST00000487245 PSG11Q9UQ72 335 aa21.7■■□□□ 1.06
HLA-C-208ENST00000487245 EP300Q09472 2414 aaPredicted RBP21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HEATR1Q9H583 2144 aaKnown RBP21.69■■□□□ 1.06
HLA-C-208ENST00000487245 IGLV3-9A0A075B6K5 115 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 KLK10O43240 276 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST1H2BKO60814 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST1H2BJP06899 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 CD55P08174 381 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 FGF7P21781 194 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST1H2BOP23527 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST1H2BBP33778 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST1H2BDP58876 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST1H2BCP62807 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 EDDM3AQ14507 147 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST2H2BEQ16778 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.69■■□□□ 1.06
HLA-C-208ENST00000487245 BTNL3Q6UXE8 466 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 GCSAMQ8N6F7 178 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 RFESDQ8TAC1 157 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST1H2BHQ93079 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST1H2BNQ99877 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 HIST1H2BMQ99879 126 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 ACTR3CQ9C0K3 210 aaPredicted RBP21.69■■□□□ 1.06
HLA-C-208ENST00000487245 CHD3Q12873 2000 aaKnown RBP21.69■■□□□ 1.06
HLA-C-208ENST00000487245 LINC00473A8K010 186 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 NDUFA6P56556 154 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 SELENOVP59797 346 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 RAB9BQ9NP90 201 aa21.69■■□□□ 1.06
HLA-C-208ENST00000487245 IGHV3-43A0A0B4J1X8 118 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 YPEL1O60688 119 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 KBTBD11O94819 623 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 IGHV3-43DP0DP04 118 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 PSMB3P49720 205 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 Q3ZCU0 254 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 ALKBH2Q6NS38 261 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 OR10G9Q8NGN4 311 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 OR10G7Q8NGN6 311 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 YPEL2Q96QA6 119 aa21.68■■□□□ 1.06
HLA-C-208ENST00000487245 ELOA3CA0A087WX78 387 aaPredicted RBP21.67■■□□□ 1.06
HLA-C-208ENST00000487245 IFITM10A6NMD0 228 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 SEC14L6B5MCN3 397 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 SOX15O60248 233 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 LHBP01229 141 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 NBL1P41271 181 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 GPR12P47775 334 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 MOGAT3Q86VF5 341 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 DIRC2Q96SL1 478 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 LRFN3Q9BTN0 628 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 NPCDR1Q9BY65 106 aa21.67■■□□□ 1.06
HLA-C-208ENST00000487245 ST8SIA5O15466 376 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 YIF1AO95070 293 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 GATA4P43694 442 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 FFAR4Q5NUL3 377 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 RPRMLQ8N4K4 120 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 C17orf112F2Z3M2 114 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 TMEM241Q24JQ0 296 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 MORN2Q502X0 79 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 ZDHHC16Q969W1 377 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 SMIM7Q9BQ49 75 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 DCTN5Q9BTE1 182 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 OR6C3Q9NZP0 311 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 GNG12Q9UBI6 72 aa21.66■■□□□ 1.06
HLA-C-208ENST00000487245 MARCH11A6NNE9 402 aa21.65■■□□□ 1.06
HLA-C-208ENST00000487245 F2RL2O00254 374 aa21.65■■□□□ 1.06
HLA-C-208ENST00000487245 TRGC2P03986 189 aa21.65■■□□□ 1.06
HLA-C-208ENST00000487245 TMEM249Q2WGJ8 235 aa21.65■■□□□ 1.06
HLA-C-208ENST00000487245 FAM180AQ6UWF9 173 aa21.65■■□□□ 1.06
HLA-C-208ENST00000487245 R3HDM4Q96D70 268 aa21.65■■□□□ 1.06
HLA-C-208ENST00000487245 DEFB108AA8MXU0 73 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 PHOX2AO14813 284 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 RBFOX2O43251 390 aaKnown RBP eCLIP21.64■■□□□ 1.06
HLA-C-208ENST00000487245 SPRY3O43610 288 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 DUTP33316 252 aaKnown RBP21.64■■□□□ 1.06
HLA-C-208ENST00000487245 TFF3Q07654 80 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 NCR3LG1Q68D85 454 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 ZNF709Q8N972 641 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 ITLN1Q8WWA0 313 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 PYGO2Q9BRQ0 406 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 SLC25A22Q9H936 323 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 MIOXQ9UGB7 285 aa21.64■■□□□ 1.06
HLA-C-208ENST00000487245 A8MXE2 369 aa21.64■■□□□ 1.05
HLA-C-208ENST00000487245 LINC00587B1AMM8 73 aa21.64■■□□□ 1.05
HLA-C-208ENST00000487245 MKRN2OSH3BPM6 223 aa21.64■■□□□ 1.05
HLA-C-208ENST00000487245 HPRT1P00492 218 aa21.64■■□□□ 1.05
HLA-C-208ENST00000487245 GGACTQ9BVM4 153 aa21.64■■□□□ 1.05
HLA-C-208ENST00000487245 GAR1Q9NY12 217 aaKnown RBP21.64■■□□□ 1.05
HLA-C-208ENST00000487245 PRR14LQ5THK1 2151 aa21.64■■□□□ 1.05
HLA-C-208ENST00000487245 C15orf62A8K5M9 175 aa21.63■■□□□ 1.05
HLA-C-208ENST00000487245 ITGB1BP1O14713 200 aa21.63■■□□□ 1.05
HLA-C-208ENST00000487245 S100A2P29034 98 aa21.63■■□□□ 1.05
HLA-C-208ENST00000487245 PDLIM3Q53GG5 364 aaPredicted RBP21.63■■□□□ 1.05
HLA-C-208ENST00000487245 VHLLQ6RSH7 139 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms