RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 AKR1C8PQ5T2L2 129 aa16.79■□□□□ 0.28
HPS3-206ENST00000486530 DPPA3Q6W0C5 159 aa16.79■□□□□ 0.28
HPS3-206ENST00000486530 ZNF439Q8NDP4 499 aa16.79■□□□□ 0.28
HPS3-206ENST00000486530 SCGB1C1Q8TD33 95 aa16.79■□□□□ 0.28
HPS3-206ENST00000486530 NEUROG1Q92886 237 aa16.79■□□□□ 0.28
HPS3-206ENST00000486530 LEAP2Q969E1 77 aa16.79■□□□□ 0.28
HPS3-206ENST00000486530 PARD6GQ9BYG4 376 aaPredicted RBP16.79■□□□□ 0.28
HPS3-206ENST00000486530 B9A039 149 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 RBMXL2O75526 392 aaKnown RBP16.78■□□□□ 0.28
HPS3-206ENST00000486530 SFTA3P0C7M3 94 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 NFYBP25208 207 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 DTD1Q8TEA8 209 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 DDB2Q92466 427 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 RPUSD1Q9UJJ7 312 aaKnown RBP16.78■□□□□ 0.28
HPS3-206ENST00000486530 SAA2-SAA4A0A096LPE2 208 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 OR8U8P0C7N1 319 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 SAA2P0DJI9 122 aaPredicted RBP16.78■□□□□ 0.28
HPS3-206ENST00000486530 ERVK-16P61578 105 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 PEA15Q15121 130 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 GUCA2BQ16661 112 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 GUK1Q16774 197 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 AARDQ4LEZ3 155 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 UTF1Q5T230 341 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 THNSL2Q86YJ6 484 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 OR10A7Q8NGE5 316 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 OR4S2Q8NH73 311 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 CCL17Q92583 94 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 ADTRPQ96IZ2 230 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 GAL3ST2Q9H3Q3 398 aa16.78■□□□□ 0.28
HPS3-206ENST00000486530 FAM157AC9JC47 383 aa16.77■□□□□ 0.27
HPS3-206ENST00000486530 PPIHO43447 177 aaKnown RBP16.77■□□□□ 0.27
HPS3-206ENST00000486530 THBS3P49746 956 aa16.77■□□□□ 0.27
HPS3-206ENST00000486530 SLC38A11Q08AI6 406 aa16.77■□□□□ 0.27
HPS3-206ENST00000486530 PUSL1Q8N0Z8 303 aaKnown RBP16.77■□□□□ 0.27
HPS3-206ENST00000486530 PSMG3Q9BT73 122 aaPredicted RBP16.77■□□□□ 0.27
HPS3-206ENST00000486530 PBDC1Q9BVG4 233 aa16.77■□□□□ 0.27
HPS3-206ENST00000486530 ACACBO00763 2458 aa16.77■□□□□ 0.27
HPS3-206ENST00000486530 BTBD17A6NE02 478 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 ZG16O60844 167 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 LY86O95711 162 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 OR9G9P0C7N8 305 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 NQO2P16083 231 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 CDSNQ15517 529 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 LRRC75BQ2VPJ9 315 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 PRAMEF5Q5TYX0 476 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 LINC01560Q8TB33 94 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 OR4C12Q96R67 309 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 YLPM1P49750 1951 aaKnown RBP16.76■□□□□ 0.27
HPS3-206ENST00000486530 ARFGEF3Q5TH69 2177 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 A0A1W2PPE3 182 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 CEBPZOSA8MTT3 80 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 SNAPINO95295 136 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 RPL31P62899 125 aaKnown RBP16.76■□□□□ 0.27
HPS3-206ENST00000486530 MRPS11P82912 194 aaKnown RBP16.76■□□□□ 0.27
HPS3-206ENST00000486530 LYG1Q8N1E2 194 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 ZNF251Q9BRH9 671 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 SCRT1Q9BWW7 348 aa16.76■□□□□ 0.27
HPS3-206ENST00000486530 ROS1P08922 2347 aa16.75■□□□□ 0.27
HPS3-206ENST00000486530 A0A1B0GW64 132 aa16.75■□□□□ 0.27
HPS3-206ENST00000486530 TNFRSF13BO14836 293 aaPredicted RBP16.75■□□□□ 0.27
HPS3-206ENST00000486530 ZNF273Q14593 569 aa16.75■□□□□ 0.27
HPS3-206ENST00000486530 ATP6V1FQ16864 119 aa16.75■□□□□ 0.27
HPS3-206ENST00000486530 C1orf229Q6ZS94 237 aaPredicted RBP16.75■□□□□ 0.27
HPS3-206ENST00000486530 SLC25A48Q6ZT89 311 aaKnown RBP16.75■□□□□ 0.27
HPS3-206ENST00000486530 ZDHHC16Q969W1 377 aa16.75■□□□□ 0.27
HPS3-206ENST00000486530 QTRT1Q9BXR0 403 aaKnown RBP16.75■□□□□ 0.27
HPS3-206ENST00000486530 HIPK2Q9H2X6 1198 aa16.75■□□□□ 0.27
HPS3-206ENST00000486530 FBXO7Q9Y3I1 522 aa16.75■□□□□ 0.27
HPS3-206ENST00000486530 ITPR1Q14643 2758 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 C9JQL5 133 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 MMP23AO75900 390 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 SCAF4O95104 1147 aaKnown RBP16.74■□□□□ 0.27
HPS3-206ENST00000486530 H2AFB1P0C5Y9 115 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 GRNP28799 593 aaKnown RBP16.74■□□□□ 0.27
HPS3-206ENST00000486530 GNG10P50151 68 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 TLE4Q04727 773 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 LRRC10Q5BKY1 277 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 OR8G2PQ6IF36 304 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 OR4A16Q8NH70 328 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 WDR61Q9GZS3 305 aaKnown RBP16.74■□□□□ 0.27
HPS3-206ENST00000486530 EIF5A2Q9GZV4 153 aaKnown RBP16.74■□□□□ 0.27
HPS3-206ENST00000486530 CISD1Q9NZ45 108 aaKnown RBP16.74■□□□□ 0.27
HPS3-206ENST00000486530 DOCK11Q5JSL3 2073 aa16.74■□□□□ 0.27
HPS3-206ENST00000486530 DNASE2O00115 360 aaPredicted RBP16.73■□□□□ 0.27
HPS3-206ENST00000486530 NDUFB3O43676 98 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 DAOP14920 347 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 OR2B8PP59922 312 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 OR52E5Q8NH55 327 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 PINX1Q96BK5 328 aaKnown RBP16.73■□□□□ 0.27
HPS3-206ENST00000486530 ZNF714Q96N38 554 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 RSG1Q9BU20 258 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 KPTNQ9Y664 436 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 PKD1L2Q7Z442 2459 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 NBEAQ8NFP9 2946 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 IGHV1-69-2A0A0G2JMI3 117 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 SPCS3P61009 180 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 SERF2P84101 59 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 SPSB3Q6PJ21 355 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 HEPN1Q6WQI6 88 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 SSX9Q7RTT3 188 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms