RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 RELQ04864 619 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-215ENST00000484252 BSXQ3C1V8 233 aa16.44■□□□□ 0.22
LIMS2-215ENST00000484252 FAM53AQ6NSI3 398 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-215ENST00000484252 OR13A1Q8NGR1 328 aa16.44■□□□□ 0.22
LIMS2-215ENST00000484252 SOX15O60248 233 aa16.43■□□□□ 0.22
LIMS2-215ENST00000484252 RBMXL2O75526 392 aaKnown RBP16.43■□□□□ 0.22
LIMS2-215ENST00000484252 FABP4P15090 132 aa16.43■□□□□ 0.22
LIMS2-215ENST00000484252 GCH1P30793 250 aa16.43■□□□□ 0.22
LIMS2-215ENST00000484252 MBNL2Q5VZF2 373 aaKnown RBP16.43■□□□□ 0.22
LIMS2-215ENST00000484252 OR10A7Q8NGE5 316 aa16.43■□□□□ 0.22
LIMS2-215ENST00000484252 ZDHHC16Q969W1 377 aa16.43■□□□□ 0.22
LIMS2-215ENST00000484252 PACRGQ96M98 296 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-215ENST00000484252 PYGO2Q9BRQ0 406 aa16.43■□□□□ 0.22
LIMS2-215ENST00000484252 DOCK7Q96N67 2140 aa16.43■□□□□ 0.22
LIMS2-215ENST00000484252 FAM90A9PA6NNJ1 464 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 DVL1O14640 695 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 PHOX2AO14813 284 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 CECR9P0C854 216 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 SSTR5P35346 364 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 TFF3Q07654 80 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 MISP3Q96FF7 219 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 SRD5A3Q9H8P0 318 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 LINC00473A8K010 186 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 RPL23P62829 140 aaKnown RBP16.42■□□□□ 0.22
LIMS2-215ENST00000484252 ACOT6Q3I5F7 207 aaPredicted RBP16.42■□□□□ 0.22
LIMS2-215ENST00000484252 AARDQ4LEZ3 155 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 C16orf82Q7Z2V1 217 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 DIRC2Q96SL1 478 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 PRO1933Q9H354 126 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 PITPNC1Q9UKF7 332 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 PSG11Q9UQ72 335 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 NCOR1O75376 2440 aa16.42■□□□□ 0.22
LIMS2-215ENST00000484252 MARCH11A6NNE9 402 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 C15orf65H3BRN8 121 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 IGLV1-44P01699 117 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 PFN1P07737 140 aaKnown RBP16.41■□□□□ 0.22
LIMS2-215ENST00000484252 TGIF2LYQ8IUE0 185 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 RNASEH2CQ8TDP1 164 aaKnown RBP16.41■□□□□ 0.22
LIMS2-215ENST00000484252 RPUSD4Q96CM3 377 aaKnown RBP16.41■□□□□ 0.22
LIMS2-215ENST00000484252 PARLQ9H300 379 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 METRNQ9UJH8 293 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 KNTC1P50748 2209 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 A8MWP6 167 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 PRR33A8MZF0 331 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 JOSD1Q15040 202 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-215ENST00000484252 VWA1Q6PCB0 445 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 C9orf106Q8NAJ2 232 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 OR4F5Q8NH21 305 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 SARAFQ96BY9 339 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 R3HDM4Q96D70 268 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 OR5B12Q96R08 314 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 OR4F4Q96R69 305 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 NDUFAF3Q9BU61 184 aa16.41■□□□□ 0.22
LIMS2-215ENST00000484252 WISP2O76076 250 aa16.4■□□□□ 0.22
LIMS2-215ENST00000484252 FABP6P51161 128 aa16.4■□□□□ 0.22
LIMS2-215ENST00000484252 RPP30P78346 268 aaKnown RBP16.4■□□□□ 0.22
LIMS2-215ENST00000484252 HNF4GQ14541 408 aa16.4■□□□□ 0.22
LIMS2-215ENST00000484252 GFI1BQ5VTD9 330 aa16.4■□□□□ 0.22
LIMS2-215ENST00000484252 LRRC29Q8WV35 223 aa16.4■□□□□ 0.22
LIMS2-215ENST00000484252 ANAPC16Q96DE5 110 aa16.4■□□□□ 0.22
LIMS2-215ENST00000484252 NEIL1Q96FI4 390 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-215ENST00000484252 MSL2Q9HCI7 577 aa16.4■□□□□ 0.22
LIMS2-215ENST00000484252 PLSCR4Q9NRQ2 329 aa16.4■□□□□ 0.22
LIMS2-215ENST00000484252 IGHV3-43A0A0B4J1X8 118 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 H7BYZ3 331 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 HMGB3O15347 200 aaKnown RBP16.39■□□□□ 0.21
LIMS2-215ENST00000484252 VENTXO95231 258 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 IGHV3-43DP0DP04 118 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 GZMHP20718 246 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 PRDX2P32119 198 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 GPR12P47775 334 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 FOXF2Q12947 444 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 USF2Q15853 346 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-215ENST00000484252 TMEM249Q2WGJ8 235 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 FAM90A1Q86YD7 464 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 CD177Q8N6Q3 437 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 JPT1Q9UK76 154 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 WDR83OSQ9Y284 106 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 C15orf62A8K5M9 175 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 HPRT1P00492 218 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 TFF1P04155 84 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 CDC34P49427 236 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-215ENST00000484252 NUTF2P61970 127 aaKnown RBP16.39■□□□□ 0.21
LIMS2-215ENST00000484252 PDZD11Q5EBL8 140 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 IGFL2Q6UWQ7 119 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 TGIF2LXQ8IUE1 241 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 TPRX1Q8N7U7 411 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 RFESDQ8TAC1 157 aa16.39■□□□□ 0.21
LIMS2-215ENST00000484252 IGHV2OR16-5A0A0B4J2B6 119 aa16.38■□□□□ 0.21
LIMS2-215ENST00000484252 MPDU1O75352 247 aa16.38■□□□□ 0.21
LIMS2-215ENST00000484252 SFTPCP11686 197 aa16.38■□□□□ 0.21
LIMS2-215ENST00000484252 RAB4AP20338 218 aa16.38■□□□□ 0.21
LIMS2-215ENST00000484252 DUTP33316 252 aaKnown RBP16.38■□□□□ 0.21
LIMS2-215ENST00000484252 GALR1P47211 349 aa16.38■□□□□ 0.21
LIMS2-215ENST00000484252 CCL11P51671 97 aa16.38■□□□□ 0.21
LIMS2-215ENST00000484252 HOXA4Q00056 320 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-215ENST00000484252 UNQ6494/PRO21346Q6UXR6 183 aa16.38■□□□□ 0.21
LIMS2-215ENST00000484252 FAM169BQ8N8A8 192 aa16.38■□□□□ 0.21
LIMS2-215ENST00000484252 PPP1R35Q8TAP8 253 aa16.38■□□□□ 0.21
LIMS2-215ENST00000484252 HIST1H2BLQ99880 126 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms